RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CACNA2D4Q7Z3S7 1137 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 LYSMD2Q8IV50 215 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 FAM217AQ8IXS0 508 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 CELF5Q8N6W0 485 aaKnown RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 AMER2Q8N7J2 671 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 SYT2Q8N9I0 419 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 GLB1L3Q8NCI6 653 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 CNNM3Q8NE01 707 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 HASPINQ8TF76 798 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 NOC3LQ8WTT2 800 aaKnown RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 WASF1Q92558 559 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 MR1Q95460 341 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 RPL10LQ96L21 214 aaKnown RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 MRGPRX4Q96LA9 322 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 FER1L6-AS2Q96M78 137 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 ZNF830Q96NB3 372 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 LENG8Q96PV6 779 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 PRAM1Q96QH2 718 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 VRK1Q99986 396 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 KLHL4Q9C0H6 718 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 PCDHAC1Q9H158 963 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 HSD3B7Q9H2F3 369 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 DPH5Q9H2P9 285 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 ZNF703Q9H7S9 590 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 TM9SF3Q9HD45 589 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 CD93Q9NPY3 652 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 MBNL1Q9NR56 388 aaKnown RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 SERINC1Q9NRX5 453 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 ABCB8Q9NUT2 735 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 TMLHEQ9NVH6 421 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 POLR3BQ9NW08 1133 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 NINJ2Q9NZG7 142 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 EHD2Q9NZN4 543 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 KCMF1Q9P0J7 381 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 SEC63Q9UGP8 760 aaKnown RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 LIMA1Q9UHB6 759 aaKnown RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 PTBP2Q9UKA9 531 aaKnown RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 ZMYND8Q9ULU4 1186 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 CHKBQ9Y259 395 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 TBC1D30Q9Y2I9 924 aa3.88□□□□□ -1.79
SF3B1-205ENST00000424674 RBM8AQ9Y5S9 174 aaKnown RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.88□□□□□ -1.79
SF3B1-205ENST00000424674 A0A087WZ62 844 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 hCG_1809904A0A1W2PP81 198 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 A0A1W2PPE2 198 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 A0A1W2PR64 198 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 C2orf78A6NCI8 922 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 LIPT2A6NK58 231 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 LACTBL1A8MY62 500 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 STX16-NPEPL1H3BU86 382 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 L7N2F9 121 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 STX16O14662 325 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 PCDH17O14917 1159 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 BCAT2O15382 392 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 PRPF4O43172 522 aaKnown RBP eCLIP3.87□□□□□ -1.796e-7■■□□□ 12.8
SF3B1-205ENST00000424674 SLC25A17O43808 307 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TULP3O75386 442 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 MTRF1O75570 445 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 RECQL5O94762 991 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 SLITRK3O94933 977 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 PCDH8O95206 1070 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 GCNT3O95395 438 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ADCY5O95622 1261 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ABHD16AO95870 558 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ABCB1P08183 1280 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ADH4P08319 380 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 SUPT20HL2P0C7V6 817 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TSPY4P0CV99 314 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TSPY10P0CW01 314 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 HSPA5P11021 654 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 KRT5P13647 590 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CPA1P15085 419 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CCNA2P20248 432 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 PAX7P23759 505 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 SERPINA4P29622 427 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 RDXP35241 583 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 GNL1P36915 607 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 LIG4P49917 911 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CDK7P50613 346 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 POLGP54098 1239 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 NRG3P56975 720 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ACTR1AP61163 376 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 PSMC6P62333 389 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 RPL7AP62424 266 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TLE1Q04724 770 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 RNASELQ05823 741 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 PPP3CAQ08209 521 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TBL3Q12788 808 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 SNX1Q13596 522 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CUL2Q13617 745 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 MXD4Q14582 209 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 MAN2A1Q16706 1144 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 MEP1BQ16820 701 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 IMMTQ16891 758 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 NHSL2Q5HYW2 709 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TEX35Q5T0J7 233 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 UTP14CQ5TAP6 766 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TPGS2Q68CL5 300 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 MRNIPQ6NTE8 343 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms