RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 HDAC4P56524 1084 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 RPL7AP62424 266 aaKnown RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 ZBTB16Q05516 673 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 MAMLD1Q13495 774 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 AASDHQ4L235 1098 aaPredicted RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 ALFQ53S48 1182 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 LYSMD4Q5XG99 296 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 ZNF776Q68DI1 518 aaPredicted RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 PLEKHA7Q6IQ23 1121 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 ADGRD1Q6QNK2 874 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 ZNF783Q6ZMS7 281 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 PRR23CQ6ZRP0 262 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 ARMCX6Q7L4S7 300 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 TMC6Q7Z403 805 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 TMEFF1Q8IYR6 380 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 FRMD1Q8N878 549 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 RPL10LQ96L21 214 aaKnown RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 MRGPRX3Q96LB0 322 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 OSBPL2Q9H1P3 480 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 RETREG1Q9H6L5 497 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 ITM2CQ9NQX7 267 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 ZNHIT6Q9NWK9 470 aaKnown RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 PPARGC1AQ9UBK2 798 aaKnown RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 ADAMTS1Q9UHI8 967 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 MBD1Q9UIS9 605 aaPredicted RBP11.24□□□□□ -0.61
USP49-204ENST00000423567 FAM186AA6NE01 2351 aa11.24□□□□□ -0.61
USP49-204ENST00000423567 EP300Q09472 2414 aaPredicted RBP11.23□□□□□ -0.61
USP49-204ENST00000423567 ILVBLA1L0T0 632 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 BCLAF3A2AJT9 711 aaKnown RBP11.23□□□□□ -0.61
USP49-204ENST00000423567 TTC34A8MYJ7 566 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 RNF8O76064 485 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 PLEKP08567 350 aaPredicted RBP11.23□□□□□ -0.61
USP49-204ENST00000423567 ETFBP38117 255 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 MAPKAPK2P49137 400 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 NUMBP49757 651 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 NRG1Q02297 640 aaPredicted RBP11.23□□□□□ -0.61
USP49-204ENST00000423567 SCAPQ12770 1279 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 ARID5BQ14865 1188 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 ACCSLQ4AC99 568 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 RAB6CQ53S08 254 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 SYCP2LQ5T4T6 812 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 HGSNATQ68CP4 663 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 ZNF683Q8IZ20 524 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 CCDC185Q8N715 623 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 GANCQ8TET4 914 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 PIGKQ92643 395 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 FOXJ1Q92949 421 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 TBC1D31Q96DN5 1066 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 TOE1Q96GM8 510 aaKnown RBP11.23□□□□□ -0.61
USP49-204ENST00000423567 MYO19Q96H55 970 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 EPAS1Q99814 870 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 NCAPGQ9BPX3 1015 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 RAB6CQ9H0N0 254 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 PARD6AQ9NPB6 346 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 USP36Q9P275 1121 aaKnown RBP11.23□□□□□ -0.61
USP49-204ENST00000423567 MYO1AQ9UBC5 1043 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 SLCO3A1Q9UIG8 710 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 SCML1Q9UN30 329 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 NCKAP1Q9Y2A7 1128 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 OTOGLQ3ZCN5 2332 aa11.23□□□□□ -0.61
USP49-204ENST00000423567 MEI4A8MW99 385 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 TK2O00142 265 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 KHNYNO15037 678 aaKnown RBP11.22□□□□□ -0.61
USP49-204ENST00000423567 SIN3BO75182 1162 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 LRIG2O94898 1065 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 RHOQP17081 205 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 TGM1P22735 817 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 L1CAMP32004 1257 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 PTGER3P43115 390 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 STK19P49842 368 aaPredicted RBP11.22□□□□□ -0.61
USP49-204ENST00000423567 RPS14P62263 151 aaKnown RBP11.22□□□□□ -0.61
USP49-204ENST00000423567 ZNF33AQ06730 810 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 ELAVL3Q14576 367 aaKnown RBP11.22□□□□□ -0.61
USP49-204ENST00000423567 CCDC6Q16204 474 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 WDR45BQ5MNZ6 344 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 CCDC122Q5T0U0 273 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 IL31Q6EBC2 164 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 RETSATQ6NUM9 610 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 RABEPKQ7Z6M1 372 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 DSG4Q86SJ6 1040 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 FAM124AQ86V42 546 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 SYT12Q8IV01 421 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 VSTM4Q8IW00 320 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 DRC7Q8IY82 874 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 RGL4Q8IZJ4 473 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 DEFB119Q8N690 84 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 DCAF4L2Q8NA75 395 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 OR8K1Q8NGG5 319 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 NETO1Q8TDF5 533 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 FNIP1Q8TF40 1166 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 MYO18AQ92614 2054 aaKnown RBP11.22□□□□□ -0.61
USP49-204ENST00000423567 ALG14Q96F25 216 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 CCDC114Q96M63 670 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 HSPA12BQ96MM6 686 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 VPS13AQ96RL7 3174 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 SPON2Q9BUD6 331 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 GPR174Q9BXC1 333 aa11.22□□□□□ -0.61
USP49-204ENST00000423567 TRIM5Q9C035 493 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms