RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 SKA1Q96BD8 255 aa19.02■□□□□ 0.64
SREBF1-206ENST00000423161 ALG14Q96F25 216 aa19.02■□□□□ 0.64
SREBF1-206ENST00000423161 PPP1R9BQ96SB3 815 aa19.02■□□□□ 0.64
SREBF1-206ENST00000423161 NDST4Q9H3R1 872 aa19.02■□□□□ 0.64
SREBF1-206ENST00000423161 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-206ENST00000423161 A0A1B0GTQ1 180 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 C10orf142B7Z368 130 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 TNFSF14O43557 240 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 PAGE1O75459 146 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 CAPNS1P04632 268 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 PRKCSHP14314 528 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-206ENST00000423161 CD38P28907 300 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 DRD3P35462 400 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 METAP1P53582 386 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 ZNF177Q13360 481 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-206ENST00000423161 ACCSLQ4AC99 568 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 OTUD1Q5VV17 481 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-206ENST00000423161 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-206ENST00000423161 DSG4Q86SJ6 1040 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 PROSER1Q86XN7 944 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 FAM71AQ8IYT1 594 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 OR8D1Q8WZ84 308 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 FEM1AQ9BSK4 669 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 SIK2Q9H0K1 926 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 CLSTN2Q9H4D0 955 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 RRN3Q9NYV6 651 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 VPS28Q9UK41 221 aa19.01■□□□□ 0.63
SREBF1-206ENST00000423161 TPX2Q9ULW0 747 aaKnown RBP19.01■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3DA0A087WVF3 549 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3IA0A087WXS9 549 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3EA0A087X179 549 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3KA0A087X1G2 549 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3FA6NER0 549 aaPredicted RBP19■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3LB9A6J9 549 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 TAF4O00268 1085 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 PLK4O00444 970 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 ATP9BO43861 1147 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 CLDN11O75508 207 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 DKK1O94907 266 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3HP0C7X1 549 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 VASPP50552 380 aaPredicted RBP19■□□□□ 0.63
SREBF1-206ENST00000423161 BPIFB4P59827 614 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 PPP2CBP62714 309 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 PPP2CAP67775 309 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 RAPGEF1Q13905 1077 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 DPCR1Q3MIW9 517 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 VWA3BQ502W6 1294 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 HSP90AA4PQ58FG1 418 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 MIIPQ5JXC2 388 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3GQ6DHY5 549 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3CQ6IPX1 549 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 C14orf80Q86SX3 495 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 ZDHHC17Q8IUH5 632 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D3Q8IZP1 549 aaPredicted RBP19■□□□□ 0.63
SREBF1-206ENST00000423161 TMEM35BQ8NCS4 154 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 SERAC1Q96JX3 654 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 NPY6RQ99463 290 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 ELF4Q99607 663 aaPredicted RBP19■□□□□ 0.63
SREBF1-206ENST00000423161 TUBGCP2Q9BSJ2 902 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 PDCL3Q9H2J4 239 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 PIGVQ9NUD9 493 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19■□□□□ 0.63
SREBF1-206ENST00000423161 FTSJ1Q9UET6 329 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 STAP1Q9ULZ2 295 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 ADAMTS20P59510 1910 aa19■□□□□ 0.63
SREBF1-206ENST00000423161 APC2O95996 2303 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 A0A1W2PR77 199 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 WNT9AO14904 365 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 RTN2O75298 545 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 TFE3P19532 575 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-206ENST00000423161 SULT1E1P49888 294 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 CDH4P55283 916 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 RNASE9P60153 205 aaKnown RBP18.99■□□□□ 0.63
SREBF1-206ENST00000423161 DRAP1Q14919 205 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-206ENST00000423161 DLG2Q15700 870 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 C5orf22Q49AR2 442 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 CCDC157Q569K6 752 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 BRMS1LQ5PSV4 323 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 PRAMEF14Q5SWL7 426 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 FAM46CQ5VWP2 391 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 Q6ZVU0 165 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 TMPRSS7Q7RTY8 843 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 GATAD2AQ86YP4 633 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 MUC3BQ9H195 1237 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 CCDC86Q9H6F5 360 aaKnown RBP18.99■□□□□ 0.63
SREBF1-206ENST00000423161 WDCPQ9H6R7 721 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 CHMP5Q9NZZ3 219 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 SARDHQ9UL12 918 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 TBC1D30Q9Y2I9 924 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 OR51B4Q9Y5P0 310 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 FHOD1Q9Y613 1164 aa18.99■□□□□ 0.63
SREBF1-206ENST00000423161 CACNA1GO43497 2377 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 C1QTNF3-AMACRE9PGA6 284 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 PES1O00541 588 aaKnown RBP18.98■□□□□ 0.63
SREBF1-206ENST00000423161 ALOX15BO15296 676 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 SLC7A4O43246 635 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 LATO43561 262 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 BNIP3LO60238 219 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 ADCY5O95622 1261 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 CDH5P33151 784 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms