RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 SLC39A3Q9BRY0 314 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 TSPAN16Q9UKR8 245 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 AURKCQ9UQB9 309 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 SH3PXD2BA1X283 911 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 KCNK1O00180 336 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 ASNSP08243 561 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 HOXC6P09630 235 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 SUPT20HL2P0C7V6 817 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 PPARGP37231 505 aaPredicted RBP16.96■□□□□ 0.31
PKP4-204ENST00000421462 HSPA13P48723 471 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 NIPAL4Q0D2K0 466 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 SUPT20HL1Q3ZLR7 823 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 GLRA4Q5JXX5 417 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 MAP1SQ66K74 1059 aaPredicted RBP16.96■□□□□ 0.31
PKP4-204ENST00000421462 LRRC8EQ6NSJ5 796 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 ELMSAN1Q6PJG2 1045 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 HERC6Q8IVU3 1022 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 OR52K1Q8NGK4 314 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 RP9Q8TA86 221 aaKnown RBP16.96■□□□□ 0.31
PKP4-204ENST00000421462 SREK1Q8WXA9 508 aaKnown RBP16.96■□□□□ 0.31
PKP4-204ENST00000421462 FCRL3Q96P31 734 aaPredicted RBP16.96■□□□□ 0.31
PKP4-204ENST00000421462 LPIN3Q9BQK8 851 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 IL1RL2Q9HB29 575 aa16.96■□□□□ 0.31
PKP4-204ENST00000421462 A0A1W2PPW3 197 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 ZNF839A8K0R7 811 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 OGTO15294 1046 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 HDAC3O15379 428 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 ENDOD1O94919 500 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 C2P06681 752 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 GP5P40197 560 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 MAGEA3P43357 314 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 NCCRP1Q6ZVX7 275 aaPredicted RBP16.95■□□□□ 0.3
PKP4-204ENST00000421462 PGAM4Q8N0Y7 254 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 MRPL4Q9BYD3 311 aaKnown RBP16.95■□□□□ 0.3
PKP4-204ENST00000421462 RPAP3Q9H6T3 665 aaPredicted RBP16.95■□□□□ 0.3
PKP4-204ENST00000421462 OLAHQ9NV23 265 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 CCDC167Q9P0B6 97 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 KPNA7A9QM74 516 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 E7ENX8 843 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 G3V2L1 256 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 BCAS2O75934 225 aaPredicted RBP16.95■□□□□ 0.3
PKP4-204ENST00000421462 PRKCBP05771 671 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 TPH1P17752 444 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 CHRNA5P30532 468 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 RPL14P50914 215 aaKnown RBP16.95■□□□□ 0.3
PKP4-204ENST00000421462 DGKDQ16760 1214 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 BOLA3Q53S33 107 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 EEF1DP3Q658K8 133 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 TTC33Q6PID6 262 aaPredicted RBP16.95■□□□□ 0.3
PKP4-204ENST00000421462 C7orf31Q8N865 590 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 ARNTL2Q8WYA1 636 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 ISOC1Q96CN7 298 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 CERS2Q96G23 380 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 TMPRSS4Q9NRS4 437 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 CDYLQ9Y232 598 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 KIAA1217Q5T5P2 1943 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 H3BNH8 94 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 NRP1O14786 923 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 PEX10O60683 326 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 OCM2P0CE71 109 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 OCMP0CE72 109 aaPredicted RBP16.95■□□□□ 0.3
PKP4-204ENST00000421462 GOT1P17174 413 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 CTBSQ01459 385 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 TP53INP2Q8IXH6 220 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 CLEC4CQ8WTT0 213 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 HTR3CQ8WXA8 447 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 LPGAT1Q92604 370 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 TBC1D23Q9NUY8 699 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 RNF19AQ9NV58 838 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 MTMR10Q9NXD2 777 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 GTSE1Q9NYZ3 720 aa16.95■□□□□ 0.3
PKP4-204ENST00000421462 YDJCA8MPS7 323 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 MCF2P10911 925 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 ALOX15P16050 662 aaPredicted RBP16.94■□□□□ 0.3
PKP4-204ENST00000421462 PRDX6P30041 224 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 ARL2P36404 184 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 BNIP3Q12983 259 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 ZNF460Q14592 562 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 PDK2Q15119 407 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 RSBN1LQ6PCB5 846 aaPredicted RBP16.94■□□□□ 0.3
PKP4-204ENST00000421462 RPS27LQ71UM5 84 aaKnown RBP16.94■□□□□ 0.3
PKP4-204ENST00000421462 MFSD3Q96ES6 412 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 MRIQ9BWK5 157 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 NAA50Q9GZZ1 169 aaKnown RBP16.94■□□□□ 0.3
PKP4-204ENST00000421462 BARX2Q9UMQ3 279 aaPredicted RBP16.94■□□□□ 0.3
PKP4-204ENST00000421462 ATE1O95260 518 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 ZBTB11O95625 1053 aaPredicted RBP16.94■□□□□ 0.3
PKP4-204ENST00000421462 POLBP06746 335 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 NDST1P52848 882 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 PSME3P61289 254 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 ADRM1Q16186 407 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 STYK1Q6J9G0 422 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 PMF1Q6P1K2 205 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 PID1Q7Z2X4 250 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 FIBCD1Q8N539 461 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 GPRASP2Q96D09 838 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 SLC2A11Q9BYW1 496 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 TRNAU1APQ9NX07 287 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms