RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 MADDQ8WXG6 1647 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 DPPA5A6NC42 116 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 USP46P62068 366 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 MED8Q96G25 268 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 PRKD2Q9BZL6 878 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 RPRD1BQ9NQG5 326 aaKnown RBP12.55□□□□□ -0.4
CLCN4-203ENST00000421085 TAS2R13Q9NYV9 303 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 ABCA8O94911 1581 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 BCLAF3A2AJT9 711 aaKnown RBP12.55□□□□□ -0.4
CLCN4-203ENST00000421085 CHADO15335 359 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 PIAS1O75925 651 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 YY1P25490 414 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 SLC26A3P40879 764 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 NAGLUP54802 743 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 LGALS3BPQ08380 585 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 DENND5AQ6IQ26 1287 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 MZT2AQ6P582 158 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 DNAJB14Q8TBM8 379 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 ATXN3LQ9H3M9 355 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 SEMA4BQ9NPR2 832 aaPredicted RBP12.55□□□□□ -0.4
CLCN4-203ENST00000421085 TUBA8Q9NY65 449 aaPredicted RBP12.55□□□□□ -0.4
CLCN4-203ENST00000421085 STON1Q9Y6Q2 735 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 BTN3A1O00481 513 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 C6orf222P0C671 652 aaPredicted RBP12.55□□□□□ -0.4
CLCN4-203ENST00000421085 LBPP18428 481 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 KLRK1P26718 216 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 S100A3P33764 101 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 MMP13P45452 471 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 SCNN1BP51168 640 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 CRADDP78560 199 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 ABATP80404 500 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 MARC1Q5VT66 337 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 BAP1Q92560 729 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
CLCN4-203ENST00000421085 ARL8BQ9NVJ2 186 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 KLHL28Q9NXS3 571 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 GALNT8Q9NY28 637 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 RBMX2Q9Y388 322 aaKnown RBP12.55□□□□□ -0.4
CLCN4-203ENST00000421085 GAKO14976 1311 aa12.55□□□□□ -0.4
CLCN4-203ENST00000421085 RGS14O43566 566 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 LIASO43766 372 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 TSPAN3O60637 253 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CXCL8P10145 99 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 KDELR1P24390 212 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 GSTM5P46439 218 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CLK2P49760 499 aaKnown RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 PPP4CP60510 307 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 HOMEZQ8IX15 550 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 RP9Q8TA86 221 aaKnown RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 ZNF671Q8TAW3 534 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 RWDD3Q9Y3V2 267 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 NTSR2O95665 410 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 MAPTP10636 758 aaKnown RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CYP4F2P78329 520 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CYP4F3Q08477 520 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 EFEMP1Q12805 493 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CCNIQ14094 377 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 SCARA3Q6AZY7 606 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 SDE2Q6IQ49 451 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 SPESP1Q6UW49 350 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CARNMT1Q8N4J0 409 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 PRELID2Q8N945 189 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 FAM13CQ8NE31 585 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 FAM151AQ8WW52 585 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 TRHDEQ9UKU6 1024 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 SF3B1O75533 1304 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 HACD1B0YJ81 288 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 RECQL5O94762 991 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CYP1A1P04798 512 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 XIAPP98170 497 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 NPNTQ6UXI9 565 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 ARHGAP36Q6ZRI8 547 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 BRINP3Q76B58 766 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 SH3RF1Q7Z6J0 888 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 SLC41A1Q8IVJ1 513 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 C4orf19Q8IY42 314 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 FBXL16Q8N461 479 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CHST13Q8NET6 341 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 RCN3Q96D15 328 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 MTFMTQ96DP5 389 aaKnown RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CRAMP1Q96RY5 1269 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 TRNAU1APQ9NX07 287 aaKnown RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 ALOX5P09917 674 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 GRIA4P48058 902 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 NDST1P52848 882 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 SCUBE3Q8IX30 993 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 ALLCQ8N6M5 410 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 LPCAT1Q8NF37 534 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 FBXO32Q969P5 355 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 TCF12Q99081 682 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 ZNF180Q9UJW8 692 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 UPP2O95045 317 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 GRK3P35626 688 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 LPIN1Q14693 890 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 ZNF662Q6ZS27 426 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 ARCQ7LC44 396 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms