RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PCDHA13Q9Y5I0 950 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 RAD54BQ9Y620 910 aa19.14■□□□□ 0.65
PTCD3-204ENST00000418628 ZNF292O60281 2723 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 A0A0A6YYK5 440 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-204ENST00000418628 FGF10O15520 208 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-204ENST00000418628 ZMPSTE24O75844 475 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 RARAP10276 462 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 GABRG2P18507 467 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 ARHGAP25P42331 645 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 MAGEA1P43355 309 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 HCAR3P49019 387 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 COPAP53621 1224 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 ECT2LQ008S8 904 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 DPYSQ14117 519 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 BOLA3Q53S33 107 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 ZC3H14Q6PJT7 736 aaKnown RBP19.13■□□□□ 0.65
PTCD3-204ENST00000418628 SERPINA13PQ6UXR4 307 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 TSC1Q92574 1164 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 ATOH1Q92858 354 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-204ENST00000418628 PPP1R9BQ96SB3 815 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 ACE2Q9BYF1 805 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-204ENST00000418628 DHX35Q9H5Z1 703 aaKnown RBP19.13■□□□□ 0.65
PTCD3-204ENST00000418628 POLMQ9NP87 494 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-204ENST00000418628 HS3ST2Q9Y278 367 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 CACNA1EQ15878 2313 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 EP300Q09472 2414 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-204ENST00000418628 GVINP1Q7Z2Y8 2422 aa19.13■□□□□ 0.65
PTCD3-204ENST00000418628 LRRK1Q38SD2 2015 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 TCRBV21S2A2A0A5A6 115 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 RCCD1A6NED2 376 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 AXIN1O15169 862 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 HLA-EP13747 358 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 EPHB2P29323 1055 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 PXNP49023 591 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-204ENST00000418628 STK19P49842 368 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-204ENST00000418628 ARSEP51690 589 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 GSDMDP57764 484 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 TPI1P60174 286 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 GNA12Q03113 381 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 SMTNL2Q2TAL5 461 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 HNRNPA1L2Q32P51 320 aaKnown RBP19.12■□□□□ 0.65
PTCD3-204ENST00000418628 FNDC3BQ53EP0 1204 aaKnown RBP19.12■□□□□ 0.65
PTCD3-204ENST00000418628 SDE2Q6IQ49 451 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 ANO7Q6IWH7 933 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 RWDD4Q6NW29 188 aaKnown RBP19.12■□□□□ 0.65
PTCD3-204ENST00000418628 RFX8Q6ZV50 586 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 UMODL1-AS1Q8N2C9 162 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 OR7D4Q8NG98 312 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 FRS2Q8WU20 508 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 KLC2Q9H0B6 622 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 EPC1Q9H2F5 836 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 VPS51Q9UID3 782 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 VPS28Q9UK41 221 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 PLA2G4CQ9UP65 541 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 R4GN57 208 aa19.12■□□□□ 0.65
PTCD3-204ENST00000418628 WDR87Q6ZQQ6 2873 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 PJA2O43164 708 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 ATP9BO43861 1147 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 CREB3O43889 395 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 GOT1P17174 413 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 NDUFV2P19404 249 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 CNR2P34972 360 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 TAS2R40P59535 323 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 STARD3Q14849 445 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 SPA17Q15506 151 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 KCNT1Q5JUK3 1230 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 HEATR6Q6AI08 1181 aaKnown RBP19.11■□□□□ 0.65
PTCD3-204ENST00000418628 ZNF366Q8N895 744 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 ARHGEF2Q92974 986 aaKnown RBP19.11■□□□□ 0.65
PTCD3-204ENST00000418628 PHOX2BQ99453 314 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 C2orf49Q9BVC5 232 aaPredicted RBP19.11■□□□□ 0.65
PTCD3-204ENST00000418628 MKRN2Q9H000 416 aaKnown RBP19.11■□□□□ 0.65
PTCD3-204ENST00000418628 MUC3BQ9H195 1237 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 MAGEH1Q9H213 219 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 CATSPERBQ9H7T0 1116 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 FBRSQ9HAH7 460 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.11■□□□□ 0.65
PTCD3-204ENST00000418628 CWC15Q9P013 229 aaKnown RBP19.11■□□□□ 0.65
PTCD3-204ENST00000418628 SLCO3A1Q9UIG8 710 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 TFR2Q9UP52 801 aa19.11■□□□□ 0.65
PTCD3-204ENST00000418628 ZFHX2Q9C0A1 2572 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-204ENST00000418628 PLXNA2O75051 1894 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 GOLGA6L3A6NEY3 463 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 BTNL10A8MVZ5 291 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 GOLGA6L6A8MZA4 724 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 EEF2KO00418 725 aaKnown RBP19.1■□□□□ 0.65
PTCD3-204ENST00000418628 HRO43593 1189 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 SNAP91O60641 907 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 ALDH1A2O94788 518 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 EPHX1P07099 455 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 ETFBP38117 255 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 ARF5P84085 180 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 AFMIDQ63HM1 303 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 POLNQ7Z5Q5 900 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 METTL3Q86U44 580 aaKnown RBP19.1■□□□□ 0.65
PTCD3-204ENST00000418628 SH2D3CQ8N5H7 860 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 ACRBPQ8NEB7 543 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 HMGB4Q8WW32 186 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 GAB3Q8WWW8 586 aa19.1■□□□□ 0.65
PTCD3-204ENST00000418628 RPL10LQ96L21 214 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms