RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 MPP3Q13368 585 aa12.15□□□□□ -0.47
LIMK1-202ENST00000418310 DCAF4L1Q3SXM0 396 aa12.15□□□□□ -0.47
LIMK1-202ENST00000418310 DHDDSQ86SQ9 333 aa12.15□□□□□ -0.47
LIMK1-202ENST00000418310 KCNMB4Q86W47 210 aa12.15□□□□□ -0.47
LIMK1-202ENST00000418310 LPPQ93052 612 aa12.15□□□□□ -0.47
LIMK1-202ENST00000418310 C11orf84Q9BUA3 381 aaPredicted RBP12.15□□□□□ -0.47
LIMK1-202ENST00000418310 GATA5Q9BWX5 397 aaPredicted RBP12.15□□□□□ -0.47
LIMK1-202ENST00000418310 SSX2IPQ9Y2D8 614 aa12.15□□□□□ -0.47
LIMK1-202ENST00000418310 CAPN8A6NHC0 703 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 TREHO43280 583 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 PGM3O95394 542 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 COX4I1P13073 169 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 SPRP35270 261 aaPredicted RBP12.14□□□□□ -0.47
LIMK1-202ENST00000418310 PAPOLAP51003 745 aaKnown RBP12.14□□□□□ -0.47
LIMK1-202ENST00000418310 USP10Q14694 798 aaKnown RBP12.14□□□□□ -0.47
LIMK1-202ENST00000418310 GRM3Q14832 879 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 ANKRD20A4Q4UJ75 823 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 KIAA0319Q5VV43 1072 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 ARHGAP36Q6ZRI8 547 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 DENND6AQ8IWF6 608 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 GPRC5AQ8NFJ5 357 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 IPMKQ8NFU5 416 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 OR6Y1Q8NGX8 325 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 URGCPQ8TCY9 931 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 CENPIQ92674 756 aaPredicted RBP12.14□□□□□ -0.47
LIMK1-202ENST00000418310 CYP4F12Q9HCS2 524 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 STAP1Q9ULZ2 295 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 MYBPHLA2RUH7 354 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 CTSHP09668 335 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 NPR3P17342 541 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 PLK1P53350 603 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 SEPT6Q14141 434 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 ARHGAP17Q68EM7 881 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 UNC93AQ86WB7 457 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 SLC41A1Q8IVJ1 513 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 TTC39CQ8N584 583 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 TMA16Q96EY4 203 aaKnown RBP12.14□□□□□ -0.47
LIMK1-202ENST00000418310 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 RBBP8Q99708 897 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 FTHL17Q9BXU8 183 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 TRIM4Q9C037 500 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 LRRC40Q9H9A6 602 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 NMRAL1Q9HBL8 299 aa12.14□□□□□ -0.47
LIMK1-202ENST00000418310 DDX43Q9NXZ2 648 aaKnown RBP12.14□□□□□ -0.47
LIMK1-202ENST00000418310 CXCL11O14625 94 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 PIGNO95427 931 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 IL1BP01584 269 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 GSTA2P09210 222 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 LILRA4P59901 499 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 MPP1Q00013 466 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 KLF10Q13118 480 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 STEAP4Q687X5 459 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CLEC20AQ6ZU45 233 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 STRADAQ7RTN6 431 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 ZDHHC17Q8IUH5 632 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 GATA6Q92908 595 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 WNT8BQ93098 351 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 PLEKHA5Q9HAU0 1116 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 TCF7L2Q9NQB0 619 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 ADARB2Q9NS39 739 aaKnown RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 MKS1Q9NXB0 559 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 SHROOM3Q8TF72 1996 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 NEMP2A6NFY4 417 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CASTOR2A6NHX0 329 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 F8W8V4 182 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 ALDH1A2O94788 518 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 MOCS2O96007 188 aaPredicted RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 SMIM10L2AP0DMW4 78 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 SMIM10L2BP0DMW5 78 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 PTPN1P18031 435 aaKnown RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CNTFP26441 200 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 SERPINB8P50452 374 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CCNA1P78396 465 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 IRX1P78414 480 aaPredicted RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 POU5F1BQ06416 359 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 PCSK7Q16549 785 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 MMEL1Q495T6 779 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 NOMO2Q5JPE7 1267 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 TIFABQ6ZNK6 161 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 GALNT4Q8N4A0 578 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 LRRC52Q8N7C0 313 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 TNIP3Q96KP6 325 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CPNE1Q99829 537 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 MLPHQ9BV36 600 aaPredicted RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 ADAMTS10Q9H324 1103 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 TLK1Q9UKI8 766 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 PDHXO00330 501 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 TSPAN8P19075 237 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CD68P34810 354 aaPredicted RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 NOS2P35228 1153 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 ADRA1BP35368 520 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 CACNB2Q08289 660 aaPredicted RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 LBRQ14739 615 aaKnown RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 ZBTB6Q15916 424 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 DGKDQ16760 1214 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 PAQR9Q6ZVX9 377 aa12.13□□□□□ -0.47
LIMK1-202ENST00000418310 PSTKQ8IV42 348 aaKnown RBP12.13□□□□□ -0.47
LIMK1-202ENST00000418310 RCN3Q96D15 328 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms