RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 INTS6Q9UL03 887 aaKnown RBP8.28□□□□□ -1.08
MDC1-203ENST00000417033 FAM50BQ9Y247 325 aa8.28□□□□□ -1.08
MDC1-203ENST00000417033 SAR1BQ9Y6B6 198 aa8.28□□□□□ -1.08
MDC1-203ENST00000417033 TICRRQ7Z2Z1 1910 aa8.28□□□□□ -1.08
MDC1-203ENST00000417033 REV3LO60673 3130 aa8.28□□□□□ -1.08
MDC1-203ENST00000417033 MYO10Q9HD67 2058 aa8.28□□□□□ -1.08
MDC1-203ENST00000417033 DOCK4Q8N1I0 1966 aa8.28□□□□□ -1.08
MDC1-203ENST00000417033 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 ZNF487B1APH4 448 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 RASA4BC9J798 803 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 H0Y626 953 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 DFFAO00273 331 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 FGF10O15520 208 aaPredicted RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 RASA4O43374 803 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 CACNG3O60359 315 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 TULP3O75386 442 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 CLDN11O75508 207 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 ADH1CP00326 375 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 CYBBP04839 570 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 RHOCP08134 193 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 CISD3P0C7P0 127 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 VAV1P15498 845 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 OR1E1P30953 314 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 CTSOP43234 321 aaPredicted RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 COPS2P61201 443 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 OTUD4Q01804 1114 aaKnown RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 GAD2Q05329 585 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 MTA1Q13330 715 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 ZNF177Q13360 481 aaPredicted RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 CDH18Q13634 790 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 GEN1Q17RS7 908 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 LONRF2Q1L5Z9 754 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 ITPRIPL2Q3MIP1 535 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 RNF219Q5W0B1 726 aaPredicted RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 TMEM215Q68D42 235 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 VSIG1Q86XK7 387 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 KIAA1958Q8N8K9 716 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 PRELID2Q8N945 189 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 ACTL9Q8TC94 416 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 ATXN2LQ8WWM7 1075 aaKnown RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 SORCS1Q8WY21 1168 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 EZH1Q92800 747 aaPredicted RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 NXPE3Q969Y0 559 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 ALG14Q96F25 216 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 ZNF419Q96HQ0 510 aaPredicted RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 REPIN1Q9BWE0 567 aaKnown RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 MAK16Q9BXY0 300 aaKnown RBP8.27□□□□□ -1.09
MDC1-203ENST00000417033 LRRC19Q9H756 370 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 CATSPERBQ9H7T0 1116 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 TBC1D30Q9Y2I9 924 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 HEY1Q9Y5J3 304 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 OR51B4Q9Y5P0 310 aa8.27□□□□□ -1.09
MDC1-203ENST00000417033 NYNRINQ9P2P1 1898 aaKnown RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 TYW5A2RUC4 315 aaKnown RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 PRRT4C9JH25 899 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 SPECC1L-ADORA2AF8WAN1 911 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 J3KR12 359 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 KIF2AO00139 706 aaPredicted RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 PGRMC1O00264 195 aaKnown RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 RAMP2O60895 175 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 SRFP11831 508 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 PABPC1P11940 636 aaKnown RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 PRLRP16471 622 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 TGM2P21980 687 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 CTHP32929 405 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 HTR7P34969 479 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 MAPKAPK2P49137 400 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 PAPOLAP51003 745 aaKnown RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 ZNF135P52742 658 aaPredicted RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 MRPS25P82663 173 aaKnown RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 GNA12Q03113 381 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 C2orf54Q08AI8 447 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 GALNT2Q10471 571 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 TDGQ13569 410 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 SNX1Q13596 522 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 TFDP2Q14188 446 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 NOMO1Q15155 1222 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 PITRM1Q5JRX3 1037 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 MPP7Q5T2T1 576 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 CCDC181Q5TID7 509 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 TTC39BQ5VTQ0 682 aaPredicted RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 TTC27Q6P3X3 843 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 LINGO4Q6UY18 593 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 PRUNE1Q86TP1 453 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 ZC3H18Q86VM9 953 aaKnown RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 RNF135Q8IUD6 432 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 UMODL1-AS1Q8N2C9 162 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 KIF18AQ8NI77 898 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 FIBINQ8TAL6 211 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 ACTRT1Q8TDG2 376 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 CSGALNACT1Q8TDX6 532 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 ARHGEF2Q92974 986 aaKnown RBP8.26□□□□□ -1.09
MDC1-203ENST00000417033 OLFM3Q96PB7 478 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 LGMNQ99538 433 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 SPON2Q9BUD6 331 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 ZDHHC4Q9NPG8 344 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 PRKAG3Q9UGI9 489 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 MUTYHQ9UIF7 546 aa8.26□□□□□ -1.09
MDC1-203ENST00000417033 CDC23Q9UJX2 597 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms