RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 KAT2BQ92831 832 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 INPP5DQ92835 1189 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 SLAMF9Q96A28 289 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 SPSB4Q96A44 273 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 MIEF2Q96C03 454 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 EFHD2Q96C19 240 aaPredicted RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 GRAMD1AQ96CP6 724 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 ITPKCQ96DU7 683 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 RBM17Q96I25 401 aaKnown RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 PIWIL1Q96J94 861 aaKnown RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 GDAP1L1Q96MZ0 367 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 MTMR9Q96QG7 549 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 CD180Q99467 661 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 PRRX2Q99811 253 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 NUP85Q9BW27 656 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 WDR11Q9BZH6 1224 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 CRNKL1Q9BZJ0 848 aaKnown RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 FOXQ1Q9C009 403 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 PCED1AQ9H1Q7 454 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 ST6GALNAC4Q9H4F1 302 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 RUBCNLQ9H714 662 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 TMEM206Q9H813 350 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 SMURF2Q9HAU4 748 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 KCNK13Q9HB14 408 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 MAGEE1Q9HCI5 957 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 GPAMQ9HCL2 828 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 FBRSL1Q9HCM7 1045 aaKnown RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 NGBQ9NPG2 151 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 PPANQ9NQ55 473 aaKnown RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 PRMT8Q9NR22 394 aaPredicted RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 SPATS2LQ9NUQ6 558 aaKnown RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 ALKBH4Q9NXW9 302 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 CNIH4Q9P003 139 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 IPO11Q9UI26 975 aaKnown RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 SCOCQ9UIL1 159 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 KCND3Q9UK17 655 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 FBXW2Q9UKT8 454 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 DSEQ9UL01 958 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 TMPRSS11EQ9UL52 423 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 STX8Q9UNK0 236 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 KCNK7Q9Y2U2 307 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 C15orf41Q9Y2V0 281 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 STRAPQ9Y3F4 350 aaKnown RBP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 PCDHGC4Q9Y5F7 938 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 ATP6V1DQ9Y5K8 247 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 NFS1Q9Y697 457 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 U3KQV3 271 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 ZNF644Q9H582 1327 aaPredicted RBP3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 CCDC187A0A096LP49 1063 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 TRBV2A0A0J9YWF9 115 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 FAM230AA0A1W2PPH8 454 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 MAGEB16A2A368 324 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 PMS2P1A4D2B8 440 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 OR6C74A6NCV1 312 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 FAM187AA6NFU0 413 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 A6NL46 340 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 ANXA2P2A6NMY6 339 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 ENO4A6NNW6 628 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 GNAT3A8MTJ3 354 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 CDRT15L2A8MXV6 281 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 PRR5-ARHGAP8B1AHC4 643 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 ZBTB42B2RXF5 422 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 KRIT1O00522 736 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 MEIS2O14770 477 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 ST8SIA5O15466 376 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 ADCY6O43306 1168 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 SULT1B1O43704 296 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 CCNT2O60583 730 aaKnown RBP3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 SCAF4O95104 1147 aaKnown RBP3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 RASAL1O95294 804 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 OR2C1O95371 312 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 LARGE1O95461 756 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 C22orf31O95567 290 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 ABHD16AO95870 558 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 AK1P00568 194 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 AVPP01185 164 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 VIPP01282 170 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 KRT6BP04259 564 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 NTRK1P04629 796 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 CFIP05156 583 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 PCCBP05166 539 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 STAG3L3P0CL85 134 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 IL1R1P14778 569 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 PECAM1P16284 738 aaPredicted RBP3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 ZNF24P17028 368 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 MYF6P23409 242 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 PTBP1P26599 531 aaKnown RBP eCLIP3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 RPA1P27694 616 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 MAP4P27816 1152 aaKnown RBP3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 CCR1P32246 355 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 RFC2P35250 354 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 SREBF1P36956 1147 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 KRT6CP48668 564 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 IRAK1P51617 712 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 NME5P56597 212 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 WNT3P56703 355 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 NRG3P56975 720 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 RAC3P60763 192 aa3.22□□□□□ -1.89
CTDSPL-203ENST00000416688 ST8SIA6P61647 398 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms