RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 SLC13A3Q8WWT9 602 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 VPS33AQ96AX1 596 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 EAF1Q96JC9 268 aaPredicted RBP6.85□□□□□ -1.31
CLIP4-205ENST00000415891 SPATA16Q9BXB7 569 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 PARD6GQ9BYG4 376 aaPredicted RBP6.85□□□□□ -1.31
CLIP4-205ENST00000415891 TRIM54Q9BYV2 358 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 USP44Q9H0E7 712 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 BRD7Q9NPI1 651 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 TMEM39AQ9NV64 488 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 C5AR2Q9P296 337 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 NARFQ9UHQ1 456 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 SLC13A4Q9UKG4 626 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 MINPP1Q9UNW1 487 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 SLC12A7Q9Y666 1083 aa6.85□□□□□ -1.31
CLIP4-205ENST00000415891 FZD9O00144 591 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 EXOC3O60645 756 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PDE8BO95263 885 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 RAB3DO95716 219 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 FTCDO95954 541 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 MBD3O95983 291 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 DARSP14868 501 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 NPR3P17342 541 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 HK1P19367 917 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 RAB4AP20338 218 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 ITGALP20701 1170 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 MPSTP25325 297 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PON1P27169 355 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CCNFP41002 786 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 RGS2P41220 211 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 GABRB2P47870 512 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CCR9P51686 369 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 HNRNPFP52597 415 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 RNASE9P60153 205 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 RAB4BP61018 213 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 UBE2HP62256 183 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 DDX39BQ13838 428 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 FAM171A1Q5VUB5 890 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 TRIM67Q6ZTA4 783 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 HTR3DQ70Z44 454 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PRUNE1Q86TP1 453 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CDR2LQ86X02 465 aaPredicted RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 SRRM1Q8IYB3 904 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 GPR65Q8IYL9 337 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 DCP1BQ8IZD4 617 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PLEKHO2Q8TD55 490 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 GTF3AQ92664 365 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 NMD3Q96D46 503 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 ZFYVE19Q96K21 471 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 DMRTB1Q96MA1 342 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 TRNT1Q96Q11 434 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CLPBQ9H078 707 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 UNC93B1Q9H1C4 597 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 LRMDAQ9H2I8 198 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PHAXQ9H814 394 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PCDH9Q9HC56 1237 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 IL1RAPL2Q9NP60 686 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 MRPS30Q9NP92 439 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 TMOD2Q9NZR1 351 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 MARK1Q9P0L2 795 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 ITGA11Q9UKX5 1188 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 NUP50Q9UKX7 468 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 NRCAMQ92823 1304 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 EFCAB10A6NFE3 127 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 FAM47DPA6NHR8 397 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 OR6C70A6NIJ9 312 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 LINC00587B1AMM8 73 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 KCNJ18B7U540 433 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 hCG_2039718K7EN88 272 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 GNB5O14775 395 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PPM1DO15297 605 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 NOBOXO60393 691 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 TBX10O75333 385 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 H2AFYO75367 372 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CDK14O94921 469 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PFKLP17858 780 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 ITGB6P18564 788 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 SDSP20132 328 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CYP2B6P20813 491 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CMA1P23946 247 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CCND1P24385 295 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 AKT1P31749 480 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 HTR7P34969 479 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PTGER3P43115 390 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 KIR3DL2P43630 455 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 ID4P47928 161 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 IRAK1P51617 712 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 HK2P52789 917 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 RPS3AP61247 264 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CYP27A1Q02318 531 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 ART3Q13508 389 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 KCNJ12Q14500 433 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PCBP2Q15366 365 aaKnown RBP eCLIP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 TIGD6Q17RP2 521 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 FLYWCH1Q4VC44 716 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 RRAGBQ5VZM2 374 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 C3orf33Q6P1S2 294 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 GGT6Q6P531 493 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 LRRC8BQ6P9F7 803 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 TMC3Q7Z5M5 1100 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 NUDT13Q86X67 352 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms