RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SIX2Q9NPC8 291 aa21.09■□□□□ 0.97
PTPRU-203ENST00000415600 CYLC1P35663 651 aaPredicted RBP21.08■□□□□ 0.97
PTPRU-203ENST00000415600 MATKP42679 507 aa21.08■□□□□ 0.97
PTPRU-203ENST00000415600 NME3Q13232 169 aa21.08■□□□□ 0.97
PTPRU-203ENST00000415600 OLFML1Q6UWY5 402 aa21.08■□□□□ 0.97
PTPRU-203ENST00000415600 RPRD1AQ96P16 312 aaPredicted RBP21.08■□□□□ 0.97
PTPRU-203ENST00000415600 FBXL12Q9NXK8 326 aa21.08■□□□□ 0.97
PTPRU-203ENST00000415600 XPO7Q9UIA9 1087 aaKnown RBP21.08■□□□□ 0.97
PTPRU-203ENST00000415600 TPX2Q9ULW0 747 aaKnown RBP21.08■□□□□ 0.97
PTPRU-203ENST00000415600 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.08■□□□□ 0.97
PTPRU-203ENST00000415600 LRRC72A6NJI9 287 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 SIN3BO75182 1162 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 GRAP2O75791 330 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 F9P00740 461 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 ZNF883P0CG24 379 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 ACSL1P33121 698 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 POLR2FP61218 127 aaKnown RBP21.07■□□□□ 0.96
PTPRU-203ENST00000415600 ETF1P62495 437 aaKnown RBP21.07■□□□□ 0.96
PTPRU-203ENST00000415600 EIF4EBP2Q13542 120 aaPredicted RBP21.07■□□□□ 0.96
PTPRU-203ENST00000415600 DRAP1Q14919 205 aaPredicted RBP21.07■□□□□ 0.96
PTPRU-203ENST00000415600 FSCBQ5H9T9 825 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 ACRBPQ8NEB7 543 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 SKA1Q96BD8 255 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 OMDQ99983 421 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 C6orf106Q9H6K1 298 aaPredicted RBP21.07■□□□□ 0.96
PTPRU-203ENST00000415600 NHEJ1Q9H9Q4 299 aaPredicted RBP21.07■□□□□ 0.96
PTPRU-203ENST00000415600 OSGEPQ9NPF4 335 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 INTS6Q9UL03 887 aaKnown RBP21.07■□□□□ 0.96
PTPRU-203ENST00000415600 MAP1BP46821 2468 aaKnown RBP21.07■□□□□ 0.96
PTPRU-203ENST00000415600 PCDH15Q96QU1 1955 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 PCNX2A6NKB5 2137 aa21.07■□□□□ 0.96
PTPRU-203ENST00000415600 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 LSM8O95777 96 aaKnown RBP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 ADH1BP00325 375 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 ERBB2P04626 1255 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 CD27P26842 260 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 SCNN1AP37088 669 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 ZNF177Q13360 481 aaPredicted RBP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 SUZ12Q15022 739 aaKnown RBP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 CST6Q15828 149 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 ZNF423Q2M1K9 1284 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 KLHDC7AQ5VTJ3 777 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 DSG4Q86SJ6 1040 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 KIF18AQ8NI77 898 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 C18orf8Q96DM3 657 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 MRGPRX3Q96LB0 322 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 NLRC4Q9NPP4 1024 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 SLC25A13Q9UJS0 675 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 FZD4Q9ULV1 537 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 MYO6Q9UM54 1294 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 EIF3CLB5ME19 914 aaKnown RBP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 M0QYT0 321 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 FSBPO95073 299 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 CD59P13987 128 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 CYP11B1P15538 503 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 PDGFRAP16234 1089 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 ELAVL3Q14576 367 aaKnown RBP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 PTPN20Q4JDL3 420 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 BRMS1LQ5PSV4 323 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 MMS22LQ6ZRQ5 1243 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 ADAT2Q7Z6V5 191 aaKnown RBP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 ERICH1Q86X53 443 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 MYEOVQ96EZ4 313 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 MYO19Q96H55 970 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 EIF3CQ99613 913 aaKnown RBP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 PRMT1Q99873 361 aaKnown RBP21.06■□□□□ 0.96
PTPRU-203ENST00000415600 STK33Q9BYT3 514 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 WDCPQ9H6R7 721 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 GAREM1Q9H706 876 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 ARHGAP20Q9P2F6 1191 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 DAAM1Q9Y4D1 1078 aa21.06■□□□□ 0.96
PTPRU-203ENST00000415600 MUC22E2RYF6 1773 aaPredicted RBP21.05■□□□□ 0.96
PTPRU-203ENST00000415600 CLDN11O75508 207 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 GJB3O75712 270 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 UCHL3P15374 230 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 GRIA4P48058 902 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 PLK1P53350 603 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 PITX1P78337 314 aaPredicted RBP21.05■□□□□ 0.96
PTPRU-203ENST00000415600 KRT83P78385 493 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 AUHQ13825 339 aaKnown RBP21.05■□□□□ 0.96
PTPRU-203ENST00000415600 C9orf64Q5T6V5 341 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 SFMBT2Q5VUG0 894 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 FBXL22Q6P050 247 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 LRRC31Q6UY01 552 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 SYT10Q6XYQ8 523 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 MMAAQ8IVH4 418 aaKnown RBP21.05■□□□□ 0.96
PTPRU-203ENST00000415600 NAXDQ8IW45 347 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 OR2I1PQ8NGU4 316 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 ZNF592Q92610 1267 aa21.05■□□□□ 0.96
PTPRU-203ENST00000415600 REXO2Q9Y3B8 237 aaKnown RBP21.05■□□□□ 0.96
PTPRU-203ENST00000415600 ADAMTS9Q9P2N4 1935 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 SPAARA0A1B0GVQ0 90 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 SSU72P8A0A1W2PR75 194 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 TTC34A8MYJ7 566 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 RNASEH2AO75792 299 aaKnown RBP21.04■□□□□ 0.96
PTPRU-203ENST00000415600 C5AR1P21730 350 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 CDH5P33151 784 aaPredicted RBP21.04■□□□□ 0.96
PTPRU-203ENST00000415600 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
PTPRU-203ENST00000415600 TRIP6Q15654 476 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms