RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 ATP6V1C1P21283 382 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ITGB3BPQ13352 177 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SLC9A5Q14940 896 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 UGCGQ16739 394 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 HECTD3Q5T447 861 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 GPR141Q7Z602 305 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ZNF606Q8WXB4 792 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 OLFM1Q99784 485 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 OMDQ99983 421 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 IRX2Q9BZI1 471 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 KCNF1Q9H3M0 494 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TMBIM4Q9HC24 238 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 RABGEF1Q9UJ41 708 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ZMYND8Q9ULU4 1186 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 MAGEA13PA6NCF6 341 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ZSCAN5CA6NGD5 496 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ANKRD63C9JTQ0 380 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SEPT4O43236 478 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SGTAO43765 313 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ADH1AP07327 375 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 GSTM1P09488 218 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TFE3P19532 575 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TALDO1P37837 337 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 GPR15P49685 360 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 PMS1P54277 932 aaKnown RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SLC12A3P55017 1021 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 XRCC4Q13426 336 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ANGPT1Q15389 498 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 E2F4Q16254 413 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 PPP1R15BQ5SWA1 713 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TMEM26Q6ZUK4 368 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 OTOP2Q7RTS6 562 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SCUBE1Q8IWY4 988 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 CAMKK1Q8N5S9 505 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ZFP28Q8NHY6 868 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 RMND5BQ96G75 393 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 BBS2Q9BXC9 721 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 FAM126AQ9BYI3 521 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SLITRK2Q9H156 845 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 CAAP1Q9H8G2 361 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 BLOC1S4Q9NUP1 217 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 DNALI1O14645 258 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TSPAN3O60637 253 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 MAFO75444 373 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ENDOD1O94919 500 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ZNF682O95780 498 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 CATP04040 527 aaKnown RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 NOS2P35228 1153 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 PARP6Q2NL67 630 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ALFQ53S48 1182 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ST13P5Q8NFI4 369 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 UGT2B28Q9BY64 529 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ATAD3AQ9NVI7 634 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SMPD4Q9NXE4 827 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 NFKBIL1Q9UBC1 381 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 PSME2Q9UL46 239 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 GTF2A1LQ9UNN4 478 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 CD3EAPO15446 510 aaKnown RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 PARNO95453 639 aaKnown RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TYMPP19971 482 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 PTENP60484 403 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 DNAJC3Q13217 504 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 GRM3Q14832 879 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ZNHIT3Q15649 155 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 NFIL3Q16649 462 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 CCDC81Q6ZN84 652 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 AGMOQ6ZNB7 445 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 MILR1Q7Z6M3 343 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SLC44A2Q8IWA5 706 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 KIAA0895Q8NCT3 520 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 GPR20Q99678 358 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TMEM121Q9BTD3 319 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TMEM216Q9P0N5 145 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SATB2Q9UPW6 733 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TNFSF13BQ9Y275 285 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TDRKHQ9Y2W6 561 aaKnown RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 ROBO3Q96MS0 1386 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 COL1A2P08123 1366 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 HTRA3P83110 453 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 RRP1BQ14684 758 aaKnown RBP8.6□□□□□ -1.03
CTNND1-206ENST00000415361 TMEM154Q6P9G4 183 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 CASP12Q6UXS9 341 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 SETD9Q8NE22 299 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 IL17RAQ96F46 866 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 CATSPERZQ9NTU4 200 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 GGT7Q9UJ14 662 aa8.6□□□□□ -1.03
CTNND1-206ENST00000415361 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-206ENST00000415361 SOWAHBA6NEL2 793 aa8.59□□□□□ -1.03
CTNND1-206ENST00000415361 GCATO75600 419 aa8.59□□□□□ -1.03
CTNND1-206ENST00000415361 SNHG28P0DPA3 235 aa8.59□□□□□ -1.03
CTNND1-206ENST00000415361 SMPD1P17405 629 aa8.59□□□□□ -1.03
CTNND1-206ENST00000415361 PSMC3P17980 439 aa8.59□□□□□ -1.03
CTNND1-206ENST00000415361 CDK16Q00536 496 aa8.59□□□□□ -1.03
CTNND1-206ENST00000415361 ZNF571Q7Z3V5 609 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-206ENST00000415361 DEFB106AQ8N104 65 aa8.59□□□□□ -1.03
CTNND1-206ENST00000415361 NKAPQ8N5F7 415 aaKnown RBP8.59□□□□□ -1.03
CTNND1-206ENST00000415361 HJURPQ8NCD3 748 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-206ENST00000415361 SLC2A14Q8TDB8 520 aa8.59□□□□□ -1.03
CTNND1-206ENST00000415361 HEXDCQ8WVB3 486 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms