RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PPP6R3Q5H9R7 873 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-207ENST00000415107 TFAP2DQ7Z6R9 452 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 METTL3Q86U44 580 aaKnown RBP12.22□□□□□ -0.45
ATG4B-207ENST00000415107 LRRC49Q8IUZ0 686 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 ZNF513Q8N8E2 541 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-207ENST00000415107 IL17RCQ8NAC3 791 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 TRIM58Q8NG06 486 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 EXD1Q8NHP7 514 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 ARHGEF2Q92974 986 aaKnown RBP12.22□□□□□ -0.45
ATG4B-207ENST00000415107 MYO19Q96H55 970 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 ALS2CR12Q96Q35 445 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 PSMB7Q99436 277 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 TMEM245Q9H330 911 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 GOLPH3Q9H4A6 298 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 NOL6Q9H6R4 1146 aaKnown RBP12.22□□□□□ -0.45
ATG4B-207ENST00000415107 LRRC19Q9H756 370 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 CD248Q9HCU0 757 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 PRMT8Q9NR22 394 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-207ENST00000415107 NDFIP2Q9NV92 336 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 MMP17Q9ULZ9 603 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 EFR3BQ9Y2G0 817 aa12.22□□□□□ -0.45
ATG4B-207ENST00000415107 CKAP5Q14008 2032 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 A0A0D9SEW6 157 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 TMEM110-MUSTN1A8MSY1 372 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 PI15O43692 258 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 PALMO75781 387 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 ZMPSTE24O75844 475 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 CD48P09326 243 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 NTSR1P30989 418 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 SSR1P43307 286 aaKnown RBP12.21□□□□□ -0.45
ATG4B-207ENST00000415107 PEX5P50542 639 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 CCR3P51677 355 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 NAP1L1P55209 391 aaKnown RBP12.21□□□□□ -0.45
ATG4B-207ENST00000415107 GEMIN4P57678 1058 aaKnown RBP12.21□□□□□ -0.45
ATG4B-207ENST00000415107 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 PAFAH1B3Q15102 231 aaKnown RBP12.21□□□□□ -0.45
ATG4B-207ENST00000415107 ATP13A4Q4VNC1 1196 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 ANKRD20A8PQ5CZ79 823 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 EOGTQ5NDL2 527 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 RNF219Q5W0B1 726 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-207ENST00000415107 EGFLAMQ63HQ2 1017 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 SLC9A4Q6AI14 798 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 Q6ZS52 159 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 SFTPA1Q8IWL2 248 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 ARHGAP12Q8IWW6 846 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 REXO1L1PQ8IX06 675 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 KCTD6Q8NC69 237 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 RPLP0P6Q8NHW5 317 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 PCDH19Q8TAB3 1148 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 CASKIN2Q8WXE0 1202 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 RAPGEF5Q92565 580 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 HES6Q96HZ4 224 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 RBM41Q96IZ5 413 aaKnown RBP12.21□□□□□ -0.45
ATG4B-207ENST00000415107 MRGPRX3Q96LB0 322 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 KCNH6Q9H252 994 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 FBRSQ9HAH7 460 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 RBM12Q9NTZ6 932 aaKnown RBP12.21□□□□□ -0.45
ATG4B-207ENST00000415107 VPS28Q9UK41 221 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 AMFRQ9UKV5 643 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 GUCA1BQ9UMX6 200 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 RAD54BQ9Y620 910 aa12.21□□□□□ -0.45
ATG4B-207ENST00000415107 CCDC163A0A0D9SF12 145 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 LRRD1A4D1F6 860 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 STK25O00506 426 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 DAPK3O43293 454 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 ATP9BO43861 1147 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 ADAM23O75077 832 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 ZRANB2O95218 330 aaKnown RBP eCLIP12.2□□□□□ -0.46
ATG4B-207ENST00000415107 DCNP07585 359 aaKnown RBP12.2□□□□□ -0.46
ATG4B-207ENST00000415107 ZFXP17010 805 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-207ENST00000415107 CDKN2BP42772 138 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 ECT2LQ008S8 904 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 ZNF33AQ06730 810 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 MTAPQ13126 283 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 ZNF234Q14588 700 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 POLD3Q15054 466 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-207ENST00000415107 HS1BP3Q53T59 392 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 NCBP2-AS2Q69YL0 99 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 RETSATQ6NUM9 610 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 TMCO3Q6UWJ1 677 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 PEX26Q7Z412 305 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 RCOR2Q8IZ40 523 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 APCDD1Q8J025 514 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 CAMKK1Q8N5S9 505 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 NPWQ8N729 165 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 PQLC3Q8N755 202 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 UBL4BQ8N7F7 174 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 DTWD2Q8NBA8 298 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 KRT35Q92764 455 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 FATE1Q969F0 183 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 RNF157Q96PX1 679 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 PRRX2Q99811 253 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 LRFN3Q9BTN0 628 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 CALN1Q9BXU9 219 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 CIPCQ9C0C6 399 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 MUC3BQ9H195 1237 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 DNAI1Q9UI46 699 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 VPS51Q9UID3 782 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 FBXO4Q9UKT5 387 aa12.2□□□□□ -0.46
ATG4B-207ENST00000415107 PLA2G4CQ9UP65 541 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms