RNA–Protein interactions for RNA: ENST00000414367.5

PCDH15-216, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 3,357 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-216ENST00000414367 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
PCDH15-216ENST00000414367 PABPC3Q9H361 631 aaKnown RBP6.91□□□□□ -1.3
PCDH15-216ENST00000414367 ACTR5Q9H9F9 607 aaPredicted RBP6.91□□□□□ -1.3
PCDH15-216ENST00000414367 CYP3A43Q9HB55 503 aa6.91□□□□□ -1.3
PCDH15-216ENST00000414367 TRPV5Q9NQA5 729 aa6.91□□□□□ -1.3
PCDH15-216ENST00000414367 SFMBT1Q9UHJ3 866 aa6.91□□□□□ -1.3
PCDH15-216ENST00000414367 SCN1AP35498 2009 aa6.91□□□□□ -1.3
PCDH15-216ENST00000414367 PCNX2A6NKB5 2137 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 ZBED1O96006 694 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 ASS1P00966 412 aaKnown RBP6.9□□□□□ -1.3
PCDH15-216ENST00000414367 HLA-EP13747 358 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 USP4Q13107 963 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 CCINQ13939 588 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 DHX34Q14147 1143 aaKnown RBP6.9□□□□□ -1.3
PCDH15-216ENST00000414367 CSRP2Q16527 193 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 KCTD19Q17RG1 926 aaPredicted RBP6.9□□□□□ -1.3
PCDH15-216ENST00000414367 FAM171BQ6P995 826 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 POTEHQ6S545 545 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 SYT13Q7L8C5 426 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 ANKS4BQ8N8V4 417 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 ADAM32Q8TC27 787 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 USP33Q8TEY7 942 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 CABS1Q96KC9 395 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 ERP44Q9BS26 406 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 DDX47Q9H0S4 455 aaKnown RBP6.9□□□□□ -1.3
PCDH15-216ENST00000414367 SYNDIG1Q9H7V2 258 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 PARD6AQ9NPB6 346 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 AMACRQ9UHK6 382 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 LGALS13Q9UHV8 139 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 TSPAN16Q9UKR8 245 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 ANGPTL2Q9UKU9 493 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 TSC2P49815 1807 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 RALGAPA1Q6GYQ0 2036 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 ANKRD11Q6UB99 2663 aaPredicted RBP6.9□□□□□ -1.3
PCDH15-216ENST00000414367 PI4KAP42356 2102 aa6.9□□□□□ -1.3
PCDH15-216ENST00000414367 FAM187AA6NFU0 413 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 DNTTP04053 509 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 RARAP10276 462 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 FMO5P49326 533 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 ATP1A2P50993 1020 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 ELF3P78545 371 aaPredicted RBP6.9□□□□□ -1.31
PCDH15-216ENST00000414367 MRPS21P82921 87 aaKnown RBP6.9□□□□□ -1.31
PCDH15-216ENST00000414367 ZNF252P-AS1Q0IIN9 211 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 ZNF77Q15935 545 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 ST3GAL2Q16842 350 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 POM121L1PQ3SYA9 428 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 PLK5Q496M5 336 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 CFAP58Q5T655 872 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 OR6B2Q6IFH4 312 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 PASD1Q8IV76 773 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 MAML2Q8IZL2 1156 aaPredicted RBP6.9□□□□□ -1.31
PCDH15-216ENST00000414367 SORCS1Q8WY21 1168 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 SPATA17Q96L03 361 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 ACOX2Q99424 681 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 SMOQ99835 787 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 OMDQ99983 421 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 SPON2Q9BUD6 331 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 LRRC19Q9H756 370 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 UBE2TQ9NPD8 197 aaPredicted RBP6.9□□□□□ -1.31
PCDH15-216ENST00000414367 KLC4Q9NSK0 619 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 NCKAP1Q9Y2A7 1128 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 COQ4Q9Y3A0 265 aa6.9□□□□□ -1.31
PCDH15-216ENST00000414367 TCRBV7S2A1N4TA0A589 114 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 ANTXRLA6NF34 631 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 NEMP1O14524 444 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 MSI1O43347 362 aaKnown RBP6.89□□□□□ -1.31
PCDH15-216ENST00000414367 OPHN1O60890 802 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 GRAP2O75791 330 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 BEST1O76090 585 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 POLR2EP19388 210 aaKnown RBP6.89□□□□□ -1.31
PCDH15-216ENST00000414367 ITPKAP23677 461 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
PCDH15-216ENST00000414367 RPL21P46778 160 aaKnown RBP6.89□□□□□ -1.31
PCDH15-216ENST00000414367 MARCKSL1P49006 195 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 BCAT1P54687 386 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 EIF3BP55884 814 aaKnown RBP6.89□□□□□ -1.31
PCDH15-216ENST00000414367 YWHAGP61981 247 aaKnown RBP eCLIP6.89□□□□□ -1.31
PCDH15-216ENST00000414367 NME3Q13232 169 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 RPS6KA1Q15418 735 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 CNGA2Q16280 664 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 TSR1Q2NL82 804 aaKnown RBP6.89□□□□□ -1.31
PCDH15-216ENST00000414367 WDR45BQ5MNZ6 344 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 PRAMEF14Q5SWL7 426 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 SH3PXD2AQ5TCZ1 1133 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 EGFLAMQ63HQ2 1017 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 CYB5D1Q6P9G0 228 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 C11orf74Q86VG3 221 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 MFN1Q8IWA4 741 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 FRMD1Q8N878 549 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 OTUB2Q96DC9 234 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 MYRFLQ96LU7 910 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 CDK5RAP1Q96SZ6 601 aaKnown RBP6.89□□□□□ -1.31
PCDH15-216ENST00000414367 MYOCQ99972 504 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 AP1M1Q9BXS5 423 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 FAM117AQ9C073 453 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 THAP2Q9H0W7 228 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 FAM114A2Q9NRY5 505 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 TPX2Q9ULW0 747 aaKnown RBP6.89□□□□□ -1.31
PCDH15-216ENST00000414367 MMP17Q9ULZ9 603 aa6.89□□□□□ -1.31
PCDH15-216ENST00000414367 NOTCH4Q99466 2003 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms