RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 INVSQ9Y283 1065 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 R3HDM2Q9Y2K5 976 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 KLHL20Q9Y2M5 609 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GPR55Q9Y2T6 319 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CCL27Q9Y4X3 112 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SNX9Q9Y5X1 595 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 NPFFR2Q9Y5X5 522 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 COL15A1P39059 1388 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SPATA31A3Q5VYP0 1347 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 LOC100506127A0A0U1RQW1 187 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SERTM2A0A1B0GWG4 89 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 A0A1W2PQH9 124 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 FRMD3A2A2Y4 597 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 GOLGA8IPA6NC78 632 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 OR14I1A6ND48 311 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ZSCAN5BA6NJL1 495 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 AHRRA9YTQ3 701 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 K7ESM1 405 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 PPEF2O14830 753 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 KMOO15229 486 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 OGTO15294 1046 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 NUDT21O43809 227 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SUSD5O60279 629 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 LMNAP02545 664 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 HMGCRP04035 888 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CSF2P04141 144 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 HMGN1P05114 100 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 FYNP06241 537 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CALM1P0DP23 149 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CALM2P0DP24 149 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CALM3P0DP25 149 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 MYBL1P10243 752 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ARP10275 920 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CLUP10909 449 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 KRT5P13647 590 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CHN1P15882 459 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 HOXB8P17481 243 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 DDX5P17844 614 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 RXRAP19793 462 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 PCSK1P29120 753 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 NMT1P30419 496 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 PCGF2P35227 344 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ETV5P41161 510 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ADCYAP1R1P41586 468 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 KIR2DL1P43626 348 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 KIR2DL2P43627 348 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 PITPNBP48739 271 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 HSPA7P48741 367 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ALDH9A1P49189 494 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 GATMP50440 423 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CCR9P51686 369 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ITGA8P53708 1063 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ATXN3P54252 364 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ATP12AP54707 1039 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 NPEPPSP55786 919 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 POLE2P56282 527 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 PCBP3P57721 371 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 LIPEQ05469 1076 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 PPARAQ07869 468 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 LGALS3BPQ08380 585 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF543Q08ER8 600 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CDC20Q12834 499 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 DYNC1I2Q13409 638 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CUL3Q13618 768 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 RAPSNQ13702 412 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 RCN2Q14257 317 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 VEPH1Q14D04 833 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 RTP5Q14D33 572 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 RRS1Q15050 365 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 RPS6KA2Q15349 733 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ZRSR1Q15695 479 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CHRNA6Q15825 494 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 UGP2Q16851 508 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 PFKFB4Q16877 469 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 MPEG1Q2M385 716 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 VMACQ2NL98 169 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 MYLK3Q32MK0 819 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ADCK5Q3MIX3 580 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 DUSP28Q4G0W2 176 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SLC9B1Q4ZJI4 515 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SIGIRRQ6IA17 410 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 MTFR2Q6P444 385 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 KLHDC10Q6PID8 442 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SLC30A9Q6PML9 568 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 TPGS1Q6ZTW0 290 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CCDC121Q6ZUS5 278 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 TAS2R42Q7RTR8 314 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SZRD1Q7Z422 152 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 BRAPQ7Z569 592 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 PLEKHH3Q7Z736 793 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SLCO6A1Q86UG4 719 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 MOGAT3Q86VF5 341 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 FJX1Q86VR8 437 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 LRRC6Q86X45 466 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CAMK1DQ8IU85 385 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ZDHHC17Q8IUH5 632 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SCUBE1Q8IWY4 988 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 DNAJC10Q8IXB1 793 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 FAM217AQ8IXS0 508 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 TCAIMQ8N3R3 496 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms