RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ITGA8P53708 1063 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 PLTPP55058 493 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 FCGRTP55899 365 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 SP3Q02447 781 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 SF3A3Q12874 501 aaKnown RBP eCLIP9.63□□□□□ -0.871e-13■□□□□ 9.9
SNHG3-201ENST00000413987 FBXO47Q5MNV8 452 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 AGMOQ6ZNB7 445 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 CEP70Q8NHQ1 597 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 SCFD1Q8WVM8 642 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 SEPT1Q8WYJ6 367 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 TMEM143Q96AN5 459 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 SERPINB12Q96P63 405 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 NUDCD1Q96RS6 583 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 CARD9Q9H257 536 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 GANQ9H2C0 597 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 VCX3BQ9H321 246 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 ABHD16BQ9H3Z7 469 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 RNPEPQ9H4A4 650 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 DCLRE1BQ9H816 532 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 TM9SF3Q9HD45 589 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 VCX3AQ9NNX9 186 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 DMAP1Q9NPF5 467 aaPredicted RBP9.63□□□□□ -0.87
SNHG3-201ENST00000413987 LRFN1Q9P244 771 aa9.63□□□□□ -0.87
SNHG3-201ENST00000413987 ZNF236Q9UL36 1845 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 MROH7Q68CQ1 1323 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 IGKV6D-21A0A0A0MT36 114 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 SMIM23A6NLE4 172 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 KIAA0391O15091 583 aaKnown RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 GCNT3O95395 438 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ALDH1A1P00352 501 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 GJB1P08034 283 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ZNF865P0CJ78 1059 aaPredicted RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 SRGAP2CP0DJJ0 459 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 DNAJB1P25685 340 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 GDI1P31150 447 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 MPP2Q14168 576 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 SPDYAQ5MJ70 313 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 TRMT10CQ7L0Y3 403 aaKnown RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 PIWIL3Q7Z3Z3 882 aaKnown RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 IRF2BP2Q7Z5L9 587 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 EXOC3L1Q86VI1 746 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 TRIM59Q8IWR1 403 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 CREB3L4Q8TEY5 395 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 GATAD2BQ8WXI9 593 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ZUFSPQ96AP4 578 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 SCLYQ96I15 445 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 FIZ1Q96SL8 496 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 CCDC28BQ9BUN5 200 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 B3GNT5Q9BYG0 378 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 XPNPEP1Q9NQW7 623 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 CYP26B1Q9NR63 512 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 GLRX2Q9NS18 164 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 KLK14Q9P0G3 267 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 DLGAP2Q9P1A6 1054 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ACTR3BQ9P1U1 418 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 KIF17Q9P2E2 1029 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 NKX1-2Q9UD57 310 aaPredicted RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ARID2Q68CP9 1835 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 GJB3O75712 270 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 LYPLA2O95372 231 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 MYCP01106 439 aaPredicted RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 SOD2P04179 222 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 HOXC6P09630 235 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ALOX15P16050 662 aaPredicted RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 CHRNA3P32297 505 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 RCN1Q15293 331 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ADIPOQQ15848 244 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 TSTQ16762 297 aaKnown RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ZCWPW2Q504Y3 356 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 DCLRE1AQ6PJP8 1040 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ZDHHC24Q6UX98 284 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 RAB11FIP2Q7L804 512 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 ZNF571Q7Z3V5 609 aaPredicted RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 REC114Q7Z4M0 266 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 MTDHQ86UE4 582 aaKnown RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 SPATA24Q86W54 205 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 SLC9A9Q8IVB4 645 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 KIAA0319LQ8IZA0 1049 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 OR6J1Q8NGC5 347 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 AGR3Q8TD06 166 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 MIPOL1Q8TD10 442 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 MAIP1Q8WWC4 291 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 MAGEB18Q96M61 343 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 PARVGQ9HBI0 331 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 IL1RAPL1Q9NZN1 696 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 LARSQ9P2J5 1176 aaKnown RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 DBR1Q9UK59 544 aaKnown RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 PCDHB10Q9UN67 800 aa9.62□□□□□ -0.87
SNHG3-201ENST00000413987 CHTOPQ9Y3Y2 248 aaKnown RBP9.62□□□□□ -0.87
SNHG3-201ENST00000413987 MYH11P35749 1972 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 TMEM120BA0PK00 339 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 MAGEA13PA6NCF6 341 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 MYADML2A6NDP7 307 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 ZBTB42B2RXF5 422 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 NT5C1B-RDH14C9J2C7 533 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 AGRPO00253 132 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 UBE2CO00762 179 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 NVLO15381 856 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms