RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TSPY26PQ9H489 355 aa15.22■□□□□ 0.03
LIMS4-201ENST00000413601 SLC25A13Q9UJS0 675 aa15.22■□□□□ 0.03
LIMS4-201ENST00000413601 CEP250Q9BV73 2442 aa15.22■□□□□ 0.03
LIMS4-201ENST00000413601 DCHS1Q96JQ0 3298 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 A0A0D9SEW6 157 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 LNP1A1A4G5 178 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 TARSL2A2RTX5 802 aaKnown RBP15.21■□□□□ 0.03
LIMS4-201ENST00000413601 FAM72CH0Y354 149 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 FTLP02792 175 aaPredicted RBP15.21■□□□□ 0.03
LIMS4-201ENST00000413601 DNTTP04053 509 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 C7P10643 843 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 GZMAP12544 262 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 VAV1P15498 845 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 OR1E1P30953 314 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 IRX4P78413 519 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 ZBTB16Q05516 673 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 MAMLD1Q13495 774 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 ACCSLQ4AC99 568 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 TRIM61Q5EBN2 209 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 FAM72AQ5TYM5 149 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 FAM72DQ6L9T8 149 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 SCYL2Q6P3W7 929 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 DCUN1D2Q6PH85 259 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 SETD3Q86TU7 594 aaPredicted RBP15.21■□□□□ 0.03
LIMS4-201ENST00000413601 FAM72BQ86X60 149 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 STK40Q8N2I9 435 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 PTPRN2Q92932 1015 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 PSMB7Q99436 277 aa15.21■□□□□ 0.03
LIMS4-201ENST00000413601 TP53BP1Q12888 1972 aaPredicted RBP15.21■□□□□ 0.03
LIMS4-201ENST00000413601 PLXNA2O75051 1894 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 PCDH15Q96QU1 1955 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 SLC30A4O14863 429 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 SNAP91O60641 907 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 RNASEH1O60930 286 aaKnown RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 RTN2O75298 545 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 PLEKP08567 350 aaPredicted RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 MAOBP27338 520 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 ACSL1P33121 698 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 DPP6P42658 865 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 ZBED6P86452 979 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 OGDHQ02218 1023 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 NRG1Q02297 640 aaPredicted RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 NFKBIBQ15653 356 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 TTC31Q49AM3 519 aaPredicted RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 TDRD12Q587J7 1177 aaKnown RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 SYCP2LQ5T4T6 812 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 C6orf118Q5T5N4 469 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 STPG1Q5TH74 334 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 PEAR1Q5VY43 1037 aaPredicted RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 HGSNATQ68CP4 663 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 PLEKHA7Q6IQ23 1121 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 RWDD4Q6NW29 188 aaKnown RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 DGLUCYQ7Z3D6 616 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 SLFN11Q7Z7L1 901 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 MMAAQ8IVH4 418 aaKnown RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 DRC7Q8IY82 874 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 RGL4Q8IZJ4 473 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 FRS2Q8WU20 508 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 SYN2Q92777 582 aaPredicted RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 FOXJ1Q92949 421 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 FAM129BQ96TA1 746 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 RTKNQ9BST9 563 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 CNPY3Q9BT09 278 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 EDEM2Q9BV94 578 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 OSBPL2Q9H1P3 480 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 PARVAQ9NVD7 372 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 PPARGC1AQ9UBK2 798 aaKnown RBP15.2■□□□□ 0.02
LIMS4-201ENST00000413601 ZNF212Q9UDV6 495 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 CAPN11Q9UMQ6 739 aa15.2■□□□□ 0.02
LIMS4-201ENST00000413601 DCDC2BA2VCK2 349 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 MEI4A8MW99 385 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 MID1O15344 667 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 ATP9BO43861 1147 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 MT-CO1P00395 513 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 GYPCP04921 128 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 CFIP05156 583 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 GLDCP23378 1020 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 HOXD12P35452 270 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 VASPP50552 380 aaPredicted RBP15.19■□□□□ 0.02
LIMS4-201ENST00000413601 LIMK1P53667 647 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 KRT83P78385 493 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 DLG2Q15700 870 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 CST6Q15828 149 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 DUOXA1Q1HG43 343 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 MANEALQ5VSG8 457 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 PYROXD2Q8N2H3 581 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 SH2D3CQ8N5H7 860 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 RNF214Q8ND24 703 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 CADM4Q8NFZ8 388 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 OR7D4Q8NG98 312 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 GANCQ8TET4 914 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 NTAN1Q96AB6 310 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 C2orf49Q9BVC5 232 aaPredicted RBP15.19■□□□□ 0.02
LIMS4-201ENST00000413601 NUSAP1Q9BXS6 441 aaKnown RBP15.19■□□□□ 0.02
LIMS4-201ENST00000413601 PABPC3Q9H361 631 aaKnown RBP15.19■□□□□ 0.02
LIMS4-201ENST00000413601 EVLQ9UI08 416 aaPredicted RBP15.19■□□□□ 0.02
LIMS4-201ENST00000413601 VPS51Q9UID3 782 aa15.19■□□□□ 0.02
LIMS4-201ENST00000413601 LUC7L2Q9Y383 392 aaKnown RBP15.19■□□□□ 0.02
LIMS4-201ENST00000413601 DOCK9Q9BZ29 2069 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms