RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 CLEC20AQ6ZU45 233 aa15.3■□□□□ 0.04
TTC39A-208ENST00000413473 MAPK15Q8TD08 544 aa15.3■□□□□ 0.04
TTC39A-208ENST00000413473 MOCOSQ96EN8 888 aa15.3■□□□□ 0.04
TTC39A-208ENST00000413473 SLC2A13Q96QE2 648 aa15.3■□□□□ 0.04
TTC39A-208ENST00000413473 SGIP1Q9BQI5 828 aa15.3■□□□□ 0.04
TTC39A-208ENST00000413473 POMPQ9Y244 141 aa15.3■□□□□ 0.04
TTC39A-208ENST00000413473 XPOTO43592 962 aaKnown RBP15.29■□□□□ 0.04
TTC39A-208ENST00000413473 AHCYL1O43865 530 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 CYP2C9P11712 490 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 COX4I1P13073 169 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 IGFBP6P24592 240 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-208ENST00000413473 LPCAT4Q643R3 524 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 PDZD4Q76G19 769 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-208ENST00000413473 ACVR1CQ8NER5 493 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 URGCPQ8TCY9 931 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 MED10Q9BTT4 135 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 EBF3Q9H4W6 596 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 CASS4Q9NQ75 786 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 CHRAC1Q9NRG0 131 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 ADAMTS6Q9UKP5 1117 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 GOLGA8TH3BQL2 631 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 TRIM13O60858 407 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 LTFP02788 710 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 HOXD8P13378 290 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-208ENST00000413473 TPH1P17752 444 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 CD68P34810 354 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-208ENST00000413473 CDC42EP1Q00587 391 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 DPP9Q86TI2 863 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 DNAJB3Q8WWF6 145 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 PPP2R3CQ969Q6 453 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 TUBGCP5Q96RT8 1024 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 NMRAL1Q9HBL8 299 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 ACSS2Q9NR19 701 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 PAPOLBQ9NRJ5 636 aaKnown RBP15.29■□□□□ 0.04
TTC39A-208ENST00000413473 PDP2Q9P2J9 529 aa15.29■□□□□ 0.04
TTC39A-208ENST00000413473 YJEFN3A6XGL0 299 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 MPOP05164 745 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 SMIM10L2AP0DMW4 78 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 SMIM10L2BP0DMW5 78 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 KCNE1P15382 129 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 WARSP23381 471 aaKnown RBP15.28■□□□□ 0.04
TTC39A-208ENST00000413473 TPI1P60174 286 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 TBL3Q12788 808 aaKnown RBP15.28■□□□□ 0.04
TTC39A-208ENST00000413473 KLF10Q13118 480 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 SNAPC2Q13487 334 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 FSCBQ5H9T9 825 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 WSCD1Q658N2 575 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 KCTD11Q693B1 232 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 SLC30A9Q6PML9 568 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 CLEC14AQ86T13 490 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 NPWQ8N729 165 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 ARRDC4Q8NCT1 418 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 KCTD13Q8WZ19 329 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 OR52B2Q96RD2 323 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 MLPHQ9BV36 600 aaPredicted RBP15.28■□□□□ 0.04
TTC39A-208ENST00000413473 ULBP1Q9BZM6 244 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 WDR6Q9NNW5 1121 aaKnown RBP15.28■□□□□ 0.04
TTC39A-208ENST00000413473 C20orf96Q9NUD7 363 aaPredicted RBP15.28■□□□□ 0.04
TTC39A-208ENST00000413473 ARHGAP26Q9UNA1 814 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 NRCAMQ92823 1304 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 CD1EP15812 388 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 CYP2B6P20813 491 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 MPP3Q13368 585 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 KCNMB4Q86W47 210 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 FBXW8Q8N3Y1 598 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 TOP6BLQ8N6T0 577 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 TDRD5Q8NAT2 981 aaKnown RBP15.28■□□□□ 0.04
TTC39A-208ENST00000413473 LENG8Q96PV6 779 aaPredicted RBP15.28■□□□□ 0.04
TTC39A-208ENST00000413473 GATA5Q9BWX5 397 aaPredicted RBP15.28■□□□□ 0.04
TTC39A-208ENST00000413473 IARS2Q9NSE4 1012 aaKnown RBP15.28■□□□□ 0.04
TTC39A-208ENST00000413473 UBP1Q9NZI7 540 aa15.28■□□□□ 0.04
TTC39A-208ENST00000413473 SHROOM3Q8TF72 1996 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 GOLGA8QA0A0J9YX86 632 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 GOLGA8OA6NCC3 632 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 GOLGA8NF8WBI6 632 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 RNASEH1O60930 286 aaKnown RBP15.27■□□□□ 0.04
TTC39A-208ENST00000413473 SERPINB6P35237 376 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 PAPOLAP51003 745 aaKnown RBP15.27■□□□□ 0.04
TTC39A-208ENST00000413473 PGGT1BP53609 377 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 PPIDQ08752 370 aaKnown RBP15.27■□□□□ 0.04
TTC39A-208ENST00000413473 ZBTB17Q13105 803 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 SFT2D3Q587I9 215 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 XKR4Q5GH76 650 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 UBXN11Q5T124 520 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 KIAA0319Q5VV43 1072 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 CTU1Q7Z7A3 348 aaKnown RBP15.27■□□□□ 0.04
TTC39A-208ENST00000413473 PDSS2Q86YH6 399 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 SLC9A7Q96T83 725 aa15.27■□□□□ 0.04
TTC39A-208ENST00000413473 DYNC1LI2O43237 492 aaPredicted RBP15.27■□□□□ 0.03
TTC39A-208ENST00000413473 CHRNGP07510 517 aa15.27■□□□□ 0.03
TTC39A-208ENST00000413473 NFKB1P19838 968 aa15.27■□□□□ 0.03
TTC39A-208ENST00000413473 SEMA3BQ13214 749 aa15.27■□□□□ 0.03
TTC39A-208ENST00000413473 HNRNPDQ14103 355 aaKnown RBP15.27■□□□□ 0.03
TTC39A-208ENST00000413473 SNX17Q15036 470 aa15.27■□□□□ 0.03
TTC39A-208ENST00000413473 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.27■□□□□ 0.03
TTC39A-208ENST00000413473 VPS39Q96JC1 886 aa15.27■□□□□ 0.03
TTC39A-208ENST00000413473 PPP1R36Q96LQ0 422 aa15.27■□□□□ 0.03
TTC39A-208ENST00000413473 GBP5Q96PP8 586 aa15.27■□□□□ 0.03
TTC39A-208ENST00000413473 WDR55Q9H6Y2 383 aaPredicted RBP15.27■□□□□ 0.03
TTC39A-208ENST00000413473 TCF7L2Q9NQB0 619 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms