RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 MMRN1Q13201 1228 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 STAT4Q14765 748 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 UBAP2Q5T6F2 1119 aaKnown RBP17.62■□□□□ 0.41
PTPRC-206ENST00000413409 FAM171A1Q5VUB5 890 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 METTL23Q86XA0 190 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 CEP57Q86XR8 500 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 PQLC3Q8N755 202 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 MYCBPAPQ8TBZ2 947 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 NT5C3BQ969T7 300 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 TTPALQ9BTX7 342 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 TRMT61BQ9BVS5 477 aaKnown RBP17.62■□□□□ 0.41
PTPRC-206ENST00000413409 LRRC4CQ9HCJ2 640 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 GPATCH2LQ9NWQ4 482 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 STAP1Q9ULZ2 295 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 AP4E1Q9UPM8 1137 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 TICRRQ7Z2Z1 1910 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 M0QZQ0 153 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 NOS2P35228 1153 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 RPL22P35268 128 aaKnown RBP17.61■□□□□ 0.41
PTPRC-206ENST00000413409 GDF10P55107 478 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 CBLBQ13191 982 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 RAB33AQ14088 237 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 ZC3H12AQ5D1E8 599 aaKnown RBP17.61■□□□□ 0.41
PTPRC-206ENST00000413409 TCEAL6Q6IPX3 200 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 VITQ6UXI7 678 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 CENPUQ71F23 418 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 PRUNE1Q86TP1 453 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 WDR5BQ86VZ2 330 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 CDKL3Q8IVW4 592 aaPredicted RBP17.61■□□□□ 0.41
PTPRC-206ENST00000413409 RIBC1Q8N443 379 aaPredicted RBP17.61■□□□□ 0.41
PTPRC-206ENST00000413409 PLD5Q8N7P1 536 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 PCDH19Q8TAB3 1148 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 EPS8L3Q8TE67 593 aaKnown RBP17.61■□□□□ 0.41
PTPRC-206ENST00000413409 TCEAL3Q969E4 200 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 TCEAL4Q96EI5 215 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 SMARCD1Q96GM5 515 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 LOXL4Q96JB6 756 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 CCDC77Q9BR77 488 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 PPCSQ9HAB8 311 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 TRPV5Q9NQA5 729 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 CNGB3Q9NQW8 809 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 CWC15Q9P013 229 aaKnown RBP17.61■□□□□ 0.41
PTPRC-206ENST00000413409 SAE1Q9UBE0 346 aaPredicted RBP17.61■□□□□ 0.41
PTPRC-206ENST00000413409 LGALS13Q9UHV8 139 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 SPAG17Q6Q759 2223 aa17.61■□□□□ 0.41
PTPRC-206ENST00000413409 SF3B1O75533 1304 aaKnown RBP eCLIP17.6■□□□□ 0.411e-8■■■■■ 103.4
PTPRC-206ENST00000413409 BCLAF3A2AJT9 711 aaKnown RBP17.6■□□□□ 0.41
PTPRC-206ENST00000413409 CLDN5O00501 218 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 AP1G2O75843 785 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 TSHRP16473 764 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 TYMPP19971 482 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 GDI1P31150 447 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 L1CAMP32004 1257 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 LSP1P33241 339 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 OR1D2P34982 312 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 SULT1E1P49888 294 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 AIF1P55008 147 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 YWHAZP63104 245 aaKnown RBP17.6■□□□□ 0.41
PTPRC-206ENST00000413409 XRCC4Q13426 336 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 AUHQ13825 339 aaKnown RBP17.6■□□□□ 0.41
PTPRC-206ENST00000413409 KYNUQ16719 465 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 CA9Q16790 459 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 RAB41Q5JT25 222 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 OTUD1Q5VV17 481 aaPredicted RBP17.6■□□□□ 0.41
PTPRC-206ENST00000413409 C4orf22Q6V702 233 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 KBTBD6Q86V97 674 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 UNC45BQ8IWX7 931 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 DEFB106AQ8N104 65 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 SCML4Q8N228 414 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 NAT8LQ8N9F0 302 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 ZCCHC14Q8WYQ9 949 aaKnown RBP17.6■□□□□ 0.41
PTPRC-206ENST00000413409 CPT1BQ92523 772 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 IRF7Q92985 503 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 NPY6RQ99463 290 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 ACBD6Q9BR61 282 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 SCNM1Q9BWG6 230 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 ZFP14Q9HCL3 533 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 SAYSD1Q9NPB0 183 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 RRN3Q9NYV6 651 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 MAST4O15021 2626 aa17.6■□□□□ 0.41
PTPRC-206ENST00000413409 A0A087WUV0 522 aaPredicted RBP17.59■□□□□ 0.41
PTPRC-206ENST00000413409 E7ESA3 106 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 ARNTLO00327 626 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 ALOX15BO15296 676 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 ZNF189O75820 626 aaPredicted RBP17.59■□□□□ 0.41
PTPRC-206ENST00000413409 TFE3P19532 575 aaPredicted RBP17.59■□□□□ 0.41
PTPRC-206ENST00000413409 IGFBP6P24592 240 aaPredicted RBP17.59■□□□□ 0.41
PTPRC-206ENST00000413409 CYP2F1P24903 491 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 HOXA6P31267 233 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 MMP13P45452 471 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 NR2C2P49116 596 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 ARL4CP56559 192 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 DAOAP59103 153 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 HIF1AQ16665 826 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 SOWAHCQ53LP3 525 aaPredicted RBP17.59■□□□□ 0.41
PTPRC-206ENST00000413409 INTS6LQ5JSJ4 861 aaKnown RBP17.59■□□□□ 0.41
PTPRC-206ENST00000413409 PRSS36Q5K4E3 855 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 RNF43Q68DV7 783 aa17.59■□□□□ 0.41
PTPRC-206ENST00000413409 DARS2Q6PI48 645 aaKnown RBP17.59■□□□□ 0.41
PTPRC-206ENST00000413409 CD300LGQ6UXG3 332 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms