RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 PKMYT1Q99640 499 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 MRPL46Q9H2W6 279 aaKnown RBP13.32□□□□□ -0.28
LITAF-203ENST00000413364 SSU72Q9NP77 194 aaKnown RBP13.32□□□□□ -0.28
LITAF-203ENST00000413364 RRN3Q9NYV6 651 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 SRRDQ9UH36 339 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 CARD8Q9Y2G2 431 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 ZNF711Q9Y462 761 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 N6AMT1Q9Y5N5 214 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 AOC2O75106 756 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 SPAG7O75391 227 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 YWHAGP61981 247 aaKnown RBP eCLIP13.32□□□□□ -0.28
LITAF-203ENST00000413364 IL9RQ01113 521 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 SCAPQ12770 1279 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 PAN2Q504Q3 1202 aaKnown RBP13.32□□□□□ -0.28
LITAF-203ENST00000413364 SNX30Q5VWJ9 437 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 RFX8Q6ZV50 586 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 LRRC49Q8IUZ0 686 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 CCDC33Q8N5R6 958 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 HTR3CQ8WXA8 447 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 CASP10Q92851 521 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 LRRC39Q96DD0 335 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 ITPKCQ96DU7 683 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 MPP4Q96JB8 637 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 MAGEB18Q96M61 343 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 RHOBTB2Q9BYZ6 727 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 WDR6Q9NNW5 1121 aaKnown RBP13.32□□□□□ -0.28
LITAF-203ENST00000413364 PNPLA8Q9NP80 782 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 KIAA1522Q9P206 1035 aaPredicted RBP13.32□□□□□ -0.28
LITAF-203ENST00000413364 FBXW11Q9UKB1 542 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 A0A0A0MRY4 1105 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 A0A1W2PPM1 405 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 TCRBV9S1A1TA0A576 114 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 MATN2O00339 956 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 EEF2KO00418 725 aaKnown RBP13.31□□□□□ -0.28
LITAF-203ENST00000413364 CBFA2T3O75081 653 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 NCAM1P13591 858 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 HOXD11P31277 338 aaPredicted RBP13.31□□□□□ -0.28
LITAF-203ENST00000413364 WDR4P57081 412 aaKnown RBP13.31□□□□□ -0.28
LITAF-203ENST00000413364 CAMK2BQ13554 666 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 SEMA5AQ13591 1074 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 PAFAH1B3Q15102 231 aaKnown RBP13.31□□□□□ -0.28
LITAF-203ENST00000413364 PRKD1Q15139 912 aaPredicted RBP13.31□□□□□ -0.28
LITAF-203ENST00000413364 RNF43Q68DV7 783 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 DCLRE1AQ6PJP8 1040 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 C4orf33Q8N1A6 199 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 FAM13CQ8NE31 585 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 UTP4Q969X6 686 aaKnown RBP13.31□□□□□ -0.28
LITAF-203ENST00000413364 SPATA13Q96N96 652 aa13.31□□□□□ -0.28
LITAF-203ENST00000413364 FAM32AQ9Y421 112 aaKnown RBP13.31□□□□□ -0.28
LITAF-203ENST00000413364 ARHGEF37A1IGU5 675 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 TYROBPO43914 113 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 F9P00740 461 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 SPATA31D3P0C874 917 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 MAGEA3P43357 314 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 SEMA3BQ13214 749 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 PDK1Q15118 436 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.3□□□□□ -0.28
LITAF-203ENST00000413364 PM20D1Q6GTS8 502 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 OVOS1Q6IE37 1185 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 SPATA31D4Q6ZUB0 917 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 SCML4Q8N228 414 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 FITM2Q8N6M3 262 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 ANKK1Q8NFD2 765 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 ADAM32Q8TC27 787 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 HASPINQ8TF76 798 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 MZB1Q8WU39 189 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 SUSD3Q96L08 255 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 TGS1Q96RS0 853 aaKnown RBP13.3□□□□□ -0.28
LITAF-203ENST00000413364 LGMNQ99538 433 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 DRC3Q9H069 523 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 TMLHEQ9NVH6 421 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 FGFR1OP2Q9NVK5 253 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 DDIT4Q9NX09 232 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 DCLK1O15075 740 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 MAP3K7O43318 606 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 PIAS1O75925 651 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 STK10O94804 968 aaKnown RBP13.3□□□□□ -0.28
LITAF-203ENST00000413364 CKBP12277 381 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 TYMPP19971 482 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 BDNFP23560 247 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 NFKBIAP25963 317 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 HOXD10P28358 340 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 FDFT1P37268 417 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 HCAR3P49019 387 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 GLUD2P49448 558 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 MAPRE1Q15691 268 aaKnown RBP13.3□□□□□ -0.28
LITAF-203ENST00000413364 ZNF534Q76KX8 674 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 CROCCP3Q8IVE0 287 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 OR10T2Q8NGX3 314 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 SLC44A1Q8WWI5 657 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 CFAP36Q96G28 342 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 XAB2Q9HCS7 855 aaKnown RBP13.3□□□□□ -0.28
LITAF-203ENST00000413364 SCHIP1Q9P0W5 487 aaPredicted RBP13.3□□□□□ -0.28
LITAF-203ENST00000413364 KLHL14Q9P2G3 628 aa13.3□□□□□ -0.28
LITAF-203ENST00000413364 RABL2AQ9UBK7 228 aaPredicted RBP13.3□□□□□ -0.28
LITAF-203ENST00000413364 ZC3H7BQ9UGR2 993 aaKnown RBP13.3□□□□□ -0.28
LITAF-203ENST00000413364 AP1B1Q10567 949 aa13.29□□□□□ -0.28
LITAF-203ENST00000413364 SPARCL1Q14515 664 aa13.29□□□□□ -0.28
LITAF-203ENST00000413364 TRAF7Q6Q0C0 670 aa13.29□□□□□ -0.28
LITAF-203ENST00000413364 DENND5BQ6ZUT9 1274 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms