RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 KCNB1Q14721 858 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SMAD1Q15797 465 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 FAM187BQ17R55 369 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 AAK1Q2M2I8 961 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 BTBD16Q32M84 506 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TUBB8Q3ZCM7 444 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CC2D1BQ5T0F9 858 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 MAP3K21Q5TCX8 1036 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TTLL5Q6EMB2 1281 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ACSM6Q6P461 480 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 DSTYKQ6XUX3 929 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 LRRC8DQ7L1W4 858 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RSRC2Q7L4I2 434 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 MAVSQ7Z434 540 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PEG10Q86TG7 708 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 MOGAT3Q86VF5 341 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ARHGEF25Q86VW2 580 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PTGR2Q8N8N7 351 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ENDOVQ8N8Q3 282 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KCNH5Q8NCM2 988 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SLC2A12Q8TD20 617 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SLC22A17Q8WUG5 538 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KAT2BQ92831 832 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TIGD1Q96MW7 591 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 UROC1Q96N76 676 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SNX18Q96RF0 628 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PRR25Q96S07 402 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CD180Q99467 661 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CDCP1Q9H5V8 836 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SFXN1Q9H9B4 322 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RIC8AQ9NPQ8 531 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ARL8BQ9NVJ2 186 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 IRAK4Q9NWZ3 460 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ALKBH4Q9NXW9 302 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 IPO11Q9UI26 975 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TBX20Q9UMR3 447 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 GPR52Q9Y2T5 361 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 LAS1LQ9Y4W2 734 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ENTPD2Q9Y5L3 495 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SIRT4Q9Y6E7 314 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 GCC2Q8IWJ2 1684 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 NSD3Q9BZ95 1437 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CCDC78A2IDD5 438 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ADM5C9JUS6 153 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 H0YIZ8 118 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TSPAN4O14817 238 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 HBP1O60381 514 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TAF5LO75529 589 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KRT38O76015 456 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 BMP15O95972 392 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 HLA-DQA2P01906 255 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CD63P08962 238 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 WT1P19544 449 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RXRAP19793 462 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 DRD4P21917 467 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KLRK1P26718 216 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TACR3P29371 465 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ELF1P32519 619 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PGM1P36871 562 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PBX1P40424 430 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KCNJ4P48050 445 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RCAN1P53805 252 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 HOXA4Q00056 320 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 FHL1Q13642 323 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 GRM4Q14833 912 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TAF5Q15542 800 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 GPR68Q15743 365 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 AASDHQ4L235 1098 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 FAM90A2PQ658T7 463 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 MSANTD2Q6P1R3 559 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KIRREL2Q6UWL6 708 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ANKS1BQ7Z6G8 1248 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TSPYL6Q8N831 410 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TERB1Q8NA31 727 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 FAM47BQ8NA70 645 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ADAMTS18Q8TE60 1221 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 NCSTNQ92542 709 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 AKAP1Q92667 903 aaKnown RBP eCLIP2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RFKQ969G6 155 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 MPP4Q96JB8 637 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 COG8Q96MW5 612 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PPP1R10Q96QC0 940 aaKnown RBP2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SLC26A6Q9BXS9 759 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CIPCQ9C0C6 399 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TWSG1Q9GZX9 223 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 VPS16Q9H269 839 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PDE11AQ9HCR9 933 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PPP1R14DQ9NXH3 145 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 C9orf78Q9NZ63 289 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 LPAR3Q9UBY5 353 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ZNF580Q9UK33 172 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 FEM1BQ9UK73 627 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ITIH6Q6UXX5 1313 aa2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 COL14A1Q05707 1796 aaKnown RBP2.87□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CRB1P82279 1406 aa2.86□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CROCC2H7BZ55 1655 aa2.86□□□□□ -1.95
RNU6-1140P-201ENST00000410517 A0A1B0GVC2 190 aa2.86□□□□□ -1.95
RNU6-1140P-201ENST00000410517 LRRC3CA6NJW4 275 aa2.86□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CGB1A6NKQ9 187 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms