RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PPP1R1BQ9UD71 204 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-208ENST00000410011 PDCD11Q14690 1871 aaKnown RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 ADM5C9JUS6 153 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 MATN2O00339 956 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 AP1G1O43747 822 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 ZBTB14O43829 449 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 CREB3O43889 395 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 HUS1O60921 280 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 RNASEH1O60930 286 aaKnown RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 C2P06681 752 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 ADCYAP1R1P41586 468 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 CLCN2P51788 898 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 CES3Q6UWW8 571 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 NAPRTQ6XQN6 538 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 SDCCAG8Q86SQ7 713 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 CPSF7Q8N684 471 aaKnown RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 SHKBP1Q8TBC3 707 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 PGAP3Q96FM1 320 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 IL22Q9GZX6 179 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 GBA3Q9H227 469 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 STK39Q9UEW8 545 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 HES2Q9Y543 173 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 FBXO21O94952 628 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 MMP3P08254 477 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 DARSP14868 501 aaKnown RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 ERCC2P18074 760 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 PITX1P78337 314 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 CCNA1P78396 465 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 ZNF618Q5T7W0 954 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 SETD3Q86TU7 594 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 KLHDC8BQ8IXV7 354 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 TNS4Q8IZW8 715 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 GDPD5Q8WTR4 605 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 HDAC11Q96DB2 347 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 CEP41Q9BYV8 373 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 DRC3Q9H069 523 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 NXF3Q9H4D5 531 aaKnown RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 TCF7L2Q9NQB0 619 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 PIGVQ9NUD9 493 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 C6orf203Q9P0P8 240 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-208ENST00000410011 RAP2CQ9Y3L5 183 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 TSC2P49815 1807 aa17.03■□□□□ 0.32
LIMS2-208ENST00000410011 LOC100653049A0A140TA62 436 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 RGSL1A5PLK6 1076 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 SLCO1B7G3V0H7 640 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 H3BNX3 289 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 KRT34O76011 436 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 VCLP18206 1134 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 POLD2P49005 469 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 USP4Q13107 963 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 MPP3Q13368 585 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 MSLNQ13421 630 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-208ENST00000410011 CUL3Q13618 768 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 DGKDQ16760 1214 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 DUSP28Q4G0W2 176 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 SLC9B1Q4ZJI4 515 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 SFT2D3Q587I9 215 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 SYPL2Q5VXT5 272 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 ITPRIPL1Q6GPH6 555 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 HPS6Q86YV9 775 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 ST13P4Q8IZP2 240 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-208ENST00000410011 TDRD5Q8NAT2 981 aaKnown RBP17.02■□□□□ 0.32
LIMS2-208ENST00000410011 RP9Q8TA86 221 aaKnown RBP17.02■□□□□ 0.32
LIMS2-208ENST00000410011 SERPINI1Q99574 410 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 CENPKQ9BS16 269 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 LRRC4Q9HBW1 653 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 SLC4A7Q9Y6M7 1214 aa17.02■□□□□ 0.32
LIMS2-208ENST00000410011 NRCAMQ92823 1304 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 SMIM35A0A1B0GVV1 85 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 KCNK1O00180 336 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 HDAC3O15379 428 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 STRNO43815 780 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 CABYRO75952 493 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 PDE5AO76074 875 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 ZCCHC18P0CG32 403 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 LIN52Q52LA3 116 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 OGFRL1Q5TC84 451 aaPredicted RBP17.02■□□□□ 0.31
LIMS2-208ENST00000410011 C16orf89Q6UX73 402 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 ZYG11AQ6WRX3 759 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 PAQR9Q6ZVX9 377 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 TMEM151AQ8N4L1 468 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 LENG8Q96PV6 779 aaPredicted RBP17.02■□□□□ 0.31
LIMS2-208ENST00000410011 AGAP2Q99490 1192 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 GPR22Q99680 433 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 GATA5Q9BWX5 397 aaPredicted RBP17.02■□□□□ 0.31
LIMS2-208ENST00000410011 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.31
LIMS2-208ENST00000410011 TMPRSS4Q9NRS4 437 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 RRN3Q9NYV6 651 aa17.02■□□□□ 0.31
LIMS2-208ENST00000410011 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 PSMD3O43242 534 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 SNAI1O95863 264 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 COL6A2P12110 1019 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 CD68P34810 354 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 LILRA4P59901 499 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 ZNF33AQ06730 810 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 RBBP5Q15291 538 aaKnown RBP17.01■□□□□ 0.31
LIMS2-208ENST00000410011 KCNMB4Q86W47 210 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 DNAAF3Q8N9W5 541 aa17.01■□□□□ 0.31
LIMS2-208ENST00000410011 GPRC5AQ8NFJ5 357 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms