RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 B3GALT6Q96L58 329 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 ULBP1Q9BZM6 244 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 ELAC1Q9H777 363 aaKnown RBP20.25■□□□□ 0.83
LIMS2-207ENST00000409808 PLA2G4CQ9UP65 541 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 H3BRJ5 948 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 UGT1A9O60656 530 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 SKAP2O75563 359 aaPredicted RBP20.25■□□□□ 0.83
LIMS2-207ENST00000409808 CAPN15O75808 1086 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 YWHAHQ04917 246 aaPredicted RBP20.25■□□□□ 0.83
LIMS2-207ENST00000409808 HEATR6Q6AI08 1181 aaKnown RBP20.25■□□□□ 0.83
LIMS2-207ENST00000409808 TRMT10BQ6PF06 316 aaKnown RBP20.25■□□□□ 0.83
LIMS2-207ENST00000409808 DEFB106AQ8N104 65 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 RBM15BQ8NDT2 890 aaKnown RBP20.25■□□□□ 0.83
LIMS2-207ENST00000409808 ATP2A3Q93084 1043 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 FAM161BQ96MY7 647 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 C11orf84Q9BUA3 381 aaPredicted RBP20.25■□□□□ 0.83
LIMS2-207ENST00000409808 UGT1A7Q9HAW7 530 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 UGT1A10Q9HAW8 530 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 UGT1A8Q9HAW9 530 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 GPAMQ9HCL2 828 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 DCDC2Q9UHG0 476 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 PCDHB8Q9UN66 801 aa20.25■□□□□ 0.83
LIMS2-207ENST00000409808 DPPA5A6NC42 116 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 NT5C1B-RDH14C9J2C7 533 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 GLRA3O75311 464 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 TADA2AO75478 443 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 AOC1P19801 751 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.24■□□□□ 0.83
LIMS2-207ENST00000409808 CRIPAKQ8N1N5 446 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 THEM5Q8N1Q8 247 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 SMARCD1Q96GM5 515 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 RILPQ96NA2 401 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 NAT9Q9BTE0 207 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 VWA8A3KMH1 1905 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 NLRC5Q86WI3 1866 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 SDR42E2A6NKP2 422 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 HHLA1C9JL84 531 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 UPP2O95045 317 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 KLHL2O95198 593 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 USP17L7P0C7H9 530 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 EFHC1Q5JVL4 640 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 KCNT2Q6UVM3 1135 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 PPP1R14CQ8TAE6 165 aa20.24■□□□□ 0.83
LIMS2-207ENST00000409808 EIF2B3Q9NR50 452 aaKnown RBP20.24■□□□□ 0.83
LIMS2-207ENST00000409808 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.24■□□□□ 0.83
LIMS2-207ENST00000409808 RCOR3Q9P2K3 495 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-207ENST00000409808 CXCL10P02778 98 aa20.23■□□□□ 0.83
LIMS2-207ENST00000409808 PDHA1P08559 390 aa20.23■□□□□ 0.83
LIMS2-207ENST00000409808 COL6A1P12109 1028 aa20.23■□□□□ 0.83
LIMS2-207ENST00000409808 TYMPP19971 482 aa20.23■□□□□ 0.83
LIMS2-207ENST00000409808 INSCQ1MX18 579 aa20.23■□□□□ 0.83
LIMS2-207ENST00000409808 DCAF6Q58WW2 860 aa20.23■□□□□ 0.83
LIMS2-207ENST00000409808 SYPL2Q5VXT5 272 aa20.23■□□□□ 0.83
LIMS2-207ENST00000409808 TMEM154Q6P9G4 183 aa20.23■□□□□ 0.83
LIMS2-207ENST00000409808 DHX35Q9H5Z1 703 aaKnown RBP20.23■□□□□ 0.83
LIMS2-207ENST00000409808 AP4E1Q9UPM8 1137 aa20.23■□□□□ 0.83
LIMS2-207ENST00000409808 LAMA2P24043 3122 aaKnown RBP20.23■□□□□ 0.83
LIMS2-207ENST00000409808 SYNJ2BP-COX16A0A087WUM0 186 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 YJEFN3A6XGL0 299 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 TBKBP1A7MCY6 615 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 ZNF189O75820 626 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 ACTR3P61158 418 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 GBE1Q04446 702 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 SLC10A2Q12908 348 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 GSTA3Q16772 222 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 FASTKD1Q53R41 847 aaKnown RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 CES4AQ5XG92 561 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 LRRC8BQ6P9F7 803 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 MPP5Q8N3R9 675 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 PIWIL2Q8TC59 973 aaKnown RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 TFB1MQ8WVM0 346 aaKnown RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 FERMT1Q9BQL6 677 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 COX16Q9P0S2 106 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 SCOCQ9UIL1 159 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 PTPRDP23468 1912 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 A0A0A0MRY4 1105 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 CCDC195A0A1B0GUA6 201 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 DGKIO75912 1065 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 STK10O94804 968 aaKnown RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 MYL4P12829 197 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 MATKP42679 507 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 SLC11A1P49279 550 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 PSEN1P49768 467 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 AP2B1P63010 937 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 TSPY1Q01534 308 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 MYLK4Q86YV6 388 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 PSTKQ8IV42 348 aaKnown RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 ULK2Q8IYT8 1036 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 DNAJC5GQ8N7S2 189 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 HTR3CQ8WXA8 447 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 VWCEQ96DN2 955 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 PAWRQ96IZ0 340 aaKnown RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 SPATA13Q96N96 652 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 TOX2Q96NM4 488 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 CSPG4P5Q96PW8 444 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 GPR62Q9BZJ7 368 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 MICAL3Q7RTP6 2002 aa20.22■□□□□ 0.83
LIMS2-207ENST00000409808 FNDC1Q4ZHG4 1894 aaPredicted RBP20.22■□□□□ 0.83
LIMS2-207ENST00000409808 TMEM189-UBE2V1I3L0A0 370 aa20.21■□□□□ 0.83
LIMS2-207ENST00000409808 FKBP6O75344 327 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms