RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SLCO3A1Q9UIG8 710 aa31.99■■■□□ 2.71
TRAF3IP1-203ENST00000409739 MBD1Q9UIS9 605 aaPredicted RBP31.99■■■□□ 2.71
TRAF3IP1-203ENST00000409739 GMEB2Q9UKD1 530 aa31.99■■■□□ 2.71
TRAF3IP1-203ENST00000409739 CFAP54Q96N23 3096 aa31.98■■■□□ 2.71
TRAF3IP1-203ENST00000409739 RNF8O76064 485 aa31.98■■■□□ 2.71
TRAF3IP1-203ENST00000409739 BYSLQ13895 437 aaKnown RBP31.98■■■□□ 2.71
TRAF3IP1-203ENST00000409739 NUMA1Q14980 2115 aa31.98■■■□□ 2.71
TRAF3IP1-203ENST00000409739 CACUL1Q86Y37 369 aa31.98■■■□□ 2.71
TRAF3IP1-203ENST00000409739 TC2NQ8N9U0 490 aa31.98■■■□□ 2.71
TRAF3IP1-203ENST00000409739 NHEJ1Q9H9Q4 299 aaPredicted RBP31.98■■■□□ 2.71
TRAF3IP1-203ENST00000409739 A0A0D9SEW6 157 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 TTC34A8MYJ7 566 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 AKR1B10O60218 316 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 LRCH4O75427 683 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 RHOQP17081 205 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 MIPP30301 263 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 SEMA3BQ13214 749 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 ZNF783Q6ZMS7 281 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 CYP4V2Q6ZWL3 525 aaPredicted RBP31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 DCLK2Q8N568 766 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 PACSIN1Q9BY11 444 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 FBRSQ9HAH7 460 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 TMEM248Q9NWD8 314 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 GPATCH2LQ9NWQ4 482 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 SLC25A13Q9UJS0 675 aa31.97■■■□□ 2.71
TRAF3IP1-203ENST00000409739 ILVBLA1L0T0 632 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 ZNF217O75362 1048 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 ELF2Q15723 593 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 DAB2IPQ5VWQ8 1189 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 PMS2CLQ68D20 193 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 DCAF4L2Q8NA75 395 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 OR7D4Q8NG98 312 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 SIPA1Q96FS4 1042 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 EPAS1Q99814 870 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 SNRNP25Q9BV90 132 aaKnown RBP31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 RETREG1Q9H6L5 497 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 NDFIP2Q9NV92 336 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 USP36Q9P275 1121 aaKnown RBP31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 PCSK1NQ9UHG2 260 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 VPS51Q9UID3 782 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 ANAPC7Q9UJX3 599 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 CYP8B1Q9UNU6 501 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 AP4E1Q9UPM8 1137 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 GON4LQ3T8J9 2241 aa31.96■■■□□ 2.71
TRAF3IP1-203ENST00000409739 IGHV1OR15-9A0A0B4J2B8 117 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 SNAP91O60641 907 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 SIN3BO75182 1162 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 RETP07949 1114 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 C7P10643 843 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 MAPKAPK2P49137 400 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 VASPP50552 380 aaPredicted RBP31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 ACAP1Q15027 740 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 METTL3Q86U44 580 aaKnown RBP31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 PRCCQ92733 491 aaPredicted RBP31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 LOXL4Q96JB6 756 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 BTBD6Q96KE9 485 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 CCDC42Q96M95 316 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 C2orf49Q9BVC5 232 aaPredicted RBP31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 SPTLC3Q9NUV7 552 aa31.95■■■□□ 2.71
TRAF3IP1-203ENST00000409739 EDDM13A0A1B0GTR0 161 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 CREB3O43889 395 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 PRPSAP2O60256 369 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 RHOBTB1O94844 696 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 NNMTP40261 264 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 KRT83P78385 493 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 GNA12Q03113 381 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 CA9Q16790 459 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 ERMARDQ5T6L9 678 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 C9orf64Q5T6V5 341 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 NCAPGQ9BPX3 1015 aa31.94■■■□□ 2.7
TRAF3IP1-203ENST00000409739 TARSL2A2RTX5 802 aaKnown RBP31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 EPN2O95208 641 aa31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 EPHB2P29323 1055 aa31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 PIGHQ14442 188 aaPredicted RBP31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 NIPA2Q8N8Q9 360 aa31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 ZNF564Q8TBZ8 553 aaPredicted RBP31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 FRS2Q8WU20 508 aa31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 CTNNBL1Q8WYA6 563 aaPredicted RBP31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 IP6K2Q9UHH9 426 aa31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 DNAI1Q9UI46 699 aa31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 USP18Q9UMW8 372 aa31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 HS3ST2Q9Y278 367 aa31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 PI4KAP42356 2102 aa31.93■■■□□ 2.7
TRAF3IP1-203ENST00000409739 ATP9BO43861 1147 aa31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 H2AFZP0C0S5 128 aa31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 VAV1P15498 845 aa31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 GLDCP23378 1020 aa31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 PCK1P35558 622 aa31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 TPMTP51580 245 aa31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 RPS14P62263 151 aaKnown RBP31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 H2AFVQ71UI9 128 aa31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 SH2D3CQ8N5H7 860 aa31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 RTL3Q8N8U3 475 aaKnown RBP31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 PTPRN2Q92932 1015 aa31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 RSPH9Q9H1X1 276 aaPredicted RBP31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 DHX35Q9H5Z1 703 aaKnown RBP31.92■■■□□ 2.7
TRAF3IP1-203ENST00000409739 MAP3K13O43283 966 aa31.91■■■□□ 2.7
TRAF3IP1-203ENST00000409739 TCF4P15884 667 aa31.91■■■□□ 2.7
TRAF3IP1-203ENST00000409739 SLC36A4Q6YBV0 504 aa31.91■■■□□ 2.7
TRAF3IP1-203ENST00000409739 KCTD15Q96SI1 283 aaPredicted RBP31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms