RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 KIAA1328Q86T90 577 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 TXLNBQ8N3L3 684 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 DCAF4L2Q8NA75 395 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 KDM1BQ8NB78 822 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 MYO19Q96H55 970 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 MRGPRX3Q96LB0 322 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 PSMB7Q99436 277 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 DESI2Q9BSY9 194 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 C2orf49Q9BVC5 232 aaPredicted RBP20.82■□□□□ 0.92
PTCD3-202ENST00000409326 IRF2BPLQ9H1B7 796 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 CD248Q9HCU0 757 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 POLMQ9NP87 494 aaPredicted RBP20.82■□□□□ 0.92
PTCD3-202ENST00000409326 ERVW-1Q9UQF0 538 aa20.82■□□□□ 0.92
PTCD3-202ENST00000409326 PLXND1Q9Y4D7 1925 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 H3BRJ5 948 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 KRT7P08729 469 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 ETFBP38117 255 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 NRLP54845 237 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 ST8SIA6P61647 398 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 POLNQ7Z5Q5 900 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 OR7D4Q8NG98 312 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 FAM71BQ8TC56 605 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 ANP32BQ92688 251 aaKnown RBP20.81■□□□□ 0.92
PTCD3-202ENST00000409326 CALR3Q96L12 384 aaKnown RBP20.81■□□□□ 0.92
PTCD3-202ENST00000409326 LACRTQ9GZZ8 138 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 DONSONQ9NYP3 566 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 CWC15Q9P013 229 aaKnown RBP20.81■□□□□ 0.92
PTCD3-202ENST00000409326 SALL4Q9UJQ4 1053 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 RAD54BQ9Y620 910 aa20.81■□□□□ 0.92
PTCD3-202ENST00000409326 CCDC163A0A0D9SF12 145 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 BUB1BO60566 1050 aaPredicted RBP20.8■□□□□ 0.92
PTCD3-202ENST00000409326 RAMP2O60895 175 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 ALDH1A2O94788 518 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 GJC1P36383 396 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 ARL4AP40617 200 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 VASPP50552 380 aaPredicted RBP20.8■□□□□ 0.92
PTCD3-202ENST00000409326 DMWDQ09019 674 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 DPYSQ14117 519 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 GSE1Q14687 1217 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 STARD3Q14849 445 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 C11orf63Q6NUN7 778 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 KIAA1211LQ6NV74 962 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 RASSF3Q86WH2 238 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 MAGEH1Q9H213 219 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 PCDH18Q9HCL0 1135 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 ZSCAN32Q9NX65 697 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 EBF1Q9UH73 591 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 VPS51Q9UID3 782 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 SLC25A13Q9UJS0 675 aa20.8■□□□□ 0.92
PTCD3-202ENST00000409326 ARIH1Q9Y4X5 557 aaPredicted RBP20.8■□□□□ 0.92
PTCD3-202ENST00000409326 TCRBV21S2A2A0A5A6 115 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 DAPK3O43293 454 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 SYNCRIPO60506 623 aaKnown RBP20.79■□□□□ 0.92
PTCD3-202ENST00000409326 SNAP91O60641 907 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 EPHX1P07099 455 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 HLA-EP13747 358 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 ERCC2P18074 760 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 COMTP21964 271 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 STK19P49842 368 aaPredicted RBP20.79■□□□□ 0.92
PTCD3-202ENST00000409326 ARSEP51690 589 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 CDH6P55285 790 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 CCZ1BP86790 482 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 CCZ1P86791 482 aaPredicted RBP20.79■□□□□ 0.92
PTCD3-202ENST00000409326 KRT81Q14533 505 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 ATP13A4Q4VNC1 1196 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 UMODL1-AS1Q8N2C9 162 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 TPCN2Q8NHX9 752 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 TSC1Q92574 1164 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 ARHGEF2Q92974 986 aaKnown RBP20.79■□□□□ 0.92
PTCD3-202ENST00000409326 RPL10LQ96L21 214 aaKnown RBP20.79■□□□□ 0.92
PTCD3-202ENST00000409326 CSPG4P5Q96PW8 444 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 ACE2Q9BYF1 805 aaPredicted RBP20.79■□□□□ 0.92
PTCD3-202ENST00000409326 NOL6Q9H6R4 1146 aaKnown RBP20.79■□□□□ 0.92
PTCD3-202ENST00000409326 ATP13A1Q9HD20 1204 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 RCOR3Q9P2K3 495 aaPredicted RBP20.79■□□□□ 0.92
PTCD3-202ENST00000409326 RAPGEFL1Q9UHV5 662 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 ADGRG1Q9Y653 693 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 DUSP10Q9Y6W6 482 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 MYO15AQ9UKN7 3530 aa20.79■□□□□ 0.92
PTCD3-202ENST00000409326 BUB1O43683 1085 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 SPOPO43791 374 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 NRDCO43847 1150 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 ACVRL1P37023 503 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 NNMTP40261 264 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 PXNP49023 591 aaPredicted RBP20.78■□□□□ 0.92
PTCD3-202ENST00000409326 FNTBP49356 437 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 YBEYP58557 167 aaPredicted RBP20.78■□□□□ 0.92
PTCD3-202ENST00000409326 KIF5AQ12840 1032 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 POLD3Q15054 466 aaPredicted RBP20.78■□□□□ 0.92
PTCD3-202ENST00000409326 LRRC38Q5VT99 294 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 HEATR6Q6AI08 1181 aaKnown RBP20.78■□□□□ 0.92
PTCD3-202ENST00000409326 IL31Q6EBC2 164 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 ANO7Q6IWH7 933 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 WDR5BQ86VZ2 330 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 LONP2Q86WA8 852 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 ZNF366Q8N895 744 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 ZBTB44Q8NCP5 570 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 MDGA1Q8NFP4 955 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 SPON2Q9BUD6 331 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 KLHL11Q9NVR0 708 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms