RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 RNASEH2AO75792 299 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 GNA14O95837 355 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 APOEP02649 317 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 KRT5P13647 590 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 GOT1P17174 413 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 TACR2P21452 398 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 CCR5P51681 352 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 YWHAZP63104 245 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 NUCB2P80303 420 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 IL9RQ01113 521 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 INAVAQ3KP66 663 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 ZC3H12AQ5D1E8 599 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 PRAMEF14Q5SWL7 426 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 RNF219Q5W0B1 726 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 RAP1GAP2Q684P5 730 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 DENND1BQ6P3S1 775 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 SND1Q7KZF4 910 aaKnown RBP eCLIP9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 TMEM110Q86TL2 294 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 TAC4Q86UU9 113 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 TRIM59Q8IWR1 403 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 APCDD1Q8J025 514 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 OR2T34Q8NGX1 318 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 NELFBQ8WX92 580 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 SLC6A18Q96N87 628 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 MED15Q96RN5 788 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 SLC4A5Q9BY07 1137 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 INTS2Q9H0H0 1204 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 POPDC2Q9HBU9 364 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 UBE2TQ9NPD8 197 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 XPO7Q9UIA9 1087 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 FZD4Q9ULV1 537 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 CEP83Q9Y592 693 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 ITIH6Q6UXX5 1313 aa9.47□□□□□ -0.89
NIF3L1-203ENST00000409129 KCNU1A8MYU2 1149 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 C10orf142B7Z368 130 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 E5RJQ4 531 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 MED7O43513 233 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 LETM1O95202 739 aaPredicted RBP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 TRUB2O95900 331 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 ADH1BP00325 375 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 IGLV3-25P01717 112 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 AFPP02771 609 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 WNT1P04628 370 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 C5AR1P21730 350 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 BMP6P22004 513 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 CD38P28907 300 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 NNMTP40261 264 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 PSMD8P48556 350 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 MARSP56192 900 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 SEMG2Q02383 582 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 KCNC4Q03721 635 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 EIF4EBP2Q13542 120 aaPredicted RBP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 SLC12A1Q13621 1099 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 MORC3Q14149 939 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 KCNJ12Q14500 433 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 SMAD1Q15797 465 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 MEA1Q16626 185 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 CHSY1Q86X52 802 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 STK40Q8N2I9 435 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 AADATQ8N5Z0 425 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 ATP6V0D2Q8N8Y2 350 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 OR14C36Q8NHC7 312 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 ZNF606Q8WXB4 792 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 PTPRN2Q92932 1015 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 BTN2A3PQ96KV6 586 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 RPL10LQ96L21 214 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 ELF4Q99607 663 aaPredicted RBP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 SRRTQ9BXP5 876 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 THAP9Q9H5L6 903 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 AASDHPPTQ9NRN7 309 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 TJP2Q9UDY2 1190 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 FTSJ1Q9UET6 329 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 SLC12A6Q9UHW9 1150 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 CYTH4Q9UIA0 394 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 CTNND2Q9UQB3 1225 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 PLXNA2O75051 1894 aa9.46□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3DA0A087WVF3 549 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3IA0A087WXS9 549 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3EA0A087X179 549 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3KA0A087X1G2 549 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 A0A1W2PR77 199 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3FA6NER0 549 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3LB9A6J9 549 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 F5H5T6 163 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 SMAPO00193 183 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 WNT9AO14904 365 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 THAP12O43422 761 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 LDOC1O95751 146 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 IL1BP01584 269 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 ITGAVP06756 1048 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 TBC1D3HP0C7X1 549 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 SLC2A3P11169 496 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 MZF1P28698 734 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 STK19P49842 368 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 PLK1P53350 603 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 STX17P56962 302 aa9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 PITX1P78337 314 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-203ENST00000409129 SULT2A1Q06520 285 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms