RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ACADVLP49748 655 aa17.98■□□□□ 0.47
SMPD4-202ENST00000409031 ORC1Q13415 861 aa17.98■□□□□ 0.47
SMPD4-202ENST00000409031 UGT3A1Q6NUS8 523 aa17.98■□□□□ 0.47
SMPD4-202ENST00000409031 TTC30BQ8N4P2 665 aa17.98■□□□□ 0.47
SMPD4-202ENST00000409031 ACTRT2Q8TDY3 377 aa17.98■□□□□ 0.47
SMPD4-202ENST00000409031 RTFDC1Q9BY42 306 aaPredicted RBP17.98■□□□□ 0.47
SMPD4-202ENST00000409031 PRKD2Q9BZL6 878 aa17.98■□□□□ 0.47
SMPD4-202ENST00000409031 LBPP18428 481 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 MTX3Q5HYI7 312 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 IL31Q6EBC2 164 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 KLHL17Q6TDP4 642 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 AADATQ8N5Z0 425 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 OTULINQ96BN8 352 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 MID1IP1Q9NPA3 183 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 ENTPD7Q9NQZ7 604 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 NBNO60934 754 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 KRT6AP02538 564 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 HMGCRP04035 888 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 ANXA6P08133 673 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 ADSLP30566 484 aaPredicted RBP17.97■□□□□ 0.47
SMPD4-202ENST00000409031 NR6A1Q15406 480 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 PTRHD1Q6GMV3 140 aaKnown RBP17.97■□□□□ 0.47
SMPD4-202ENST00000409031 DENND5AQ6IQ26 1287 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 ASIC4Q96FT7 647 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 PCDHB18PQ96TA0 734 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 DYRK4Q9NR20 520 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 DDIT4Q9NX09 232 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 TRHDEQ9UKU6 1024 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 PIK3C2BO00750 1634 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.97■□□□□ 0.47
SMPD4-202ENST00000409031 CCNKO75909 580 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 CABYRO75952 493 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 RECQL5O94762 991 aaPredicted RBP17.97■□□□□ 0.47
SMPD4-202ENST00000409031 ATP5F1P24539 256 aaPredicted RBP17.97■□□□□ 0.47
SMPD4-202ENST00000409031 GNL1P36915 607 aaPredicted RBP17.97■□□□□ 0.47
SMPD4-202ENST00000409031 LSM3P62310 102 aaKnown RBP17.97■□□□□ 0.47
SMPD4-202ENST00000409031 PTAR1Q7Z6K3 402 aaPredicted RBP17.97■□□□□ 0.47
SMPD4-202ENST00000409031 PNPLA8Q9NP80 782 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 CYP3A7-CYP3A51PA0A087WV96 503 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 VPS26AO75436 327 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 NCAM1P13591 858 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 CYP3A7P24462 503 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 GSSP48637 474 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 ADGRE1Q14246 886 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 LIPMQ5VYY2 423 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 ANKS6Q68DC2 871 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 C19orf60Q96EN9 201 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 AP5M1Q9H0R1 490 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 EPB41L1Q9H4G0 881 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 PRDM16Q9HAZ2 1276 aa17.97■□□□□ 0.47
SMPD4-202ENST00000409031 MAP3K20Q9NYL2 800 aaKnown RBP17.97■□□□□ 0.47
SMPD4-202ENST00000409031 ERI2A8K979 691 aaKnown RBP17.96■□□□□ 0.47
SMPD4-202ENST00000409031 MTA2O94776 668 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 ARPP19P56211 112 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 NOMO3P69849 1222 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 CRTC3Q6UUV7 619 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-202ENST00000409031 ABI1Q8IZP0 508 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 BANPQ8N9N5 519 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 APBA2Q99767 749 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 ENOPH1Q9UHY7 261 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 TMED5Q9Y3A6 229 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 ALOX15P16050 662 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-202ENST00000409031 ADRA2BP18089 450 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 MAPK1P28482 360 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 RRM2P31350 389 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 MSX2P35548 267 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-202ENST00000409031 ITGA1P56199 1179 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 SPIRE1Q08AE8 756 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 RFX4Q33E94 735 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 TBC1D21Q8IYX1 336 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 SUN5Q8TC36 379 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 HM13Q8TCT9 377 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 MARK4Q96L34 752 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 TEX13BQ9BXU2 312 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 EFCAB14O75071 495 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 CSE1LP55060 971 aaKnown RBP17.96■□□□□ 0.47
SMPD4-202ENST00000409031 TLDC1Q6P9B6 456 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 UNKQ9C0B0 810 aaKnown RBP17.96■□□□□ 0.47
SMPD4-202ENST00000409031 WDCPQ9H6R7 721 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 CCNB1IP1Q9NPC3 277 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 KRT84Q9NSB2 600 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 PIH1D1Q9NWS0 290 aaKnown RBP17.96■□□□□ 0.47
SMPD4-202ENST00000409031 UBA2Q9UBT2 640 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-202ENST00000409031 RAPGEFL1Q9UHV5 662 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 SPATA2Q9UM82 520 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 SPATA31D1Q6ZQQ2 1576 aa17.96■□□□□ 0.47
SMPD4-202ENST00000409031 A0A087X1B8 175 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 A0A0A0MRY4 1105 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 SAGE2PA6NJ88 616 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 PAGE2BQ5JRK9 111 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 PNPT1Q8TCS8 783 aaKnown RBP17.95■□□□□ 0.46
SMPD4-202ENST00000409031 SPATA13Q96N96 652 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 TAAR1Q96RJ0 339 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 FBXO28Q9NVF7 368 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 NUDT5Q9UKK9 219 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 TMCC3Q9ULS5 477 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 WBP11Q9Y2W2 641 aaKnown RBP17.95■□□□□ 0.46
SMPD4-202ENST00000409031 PRIM2P49643 509 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 SLC7A2P52569 658 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms