RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 GIPC2Q8TF65 315 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 ZNF75CPQ92670 426 aaPredicted RBP25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 IQCGQ9H095 443 aaKnown RBP25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 C12orf65Q9H3J6 166 aaKnown RBP25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 FNIP2Q9P278 1114 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 CDY1Q9Y6F8 540 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 FNDC1Q4ZHG4 1894 aaPredicted RBP25.2■■□□□ 1.63
DNMT3A-206ENST00000406659 TANC1Q9C0D5 1861 aa25.2■■□□□ 1.63
DNMT3A-206ENST00000406659 NIPAL4Q0D2K0 466 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 TRIM60Q495X7 471 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 AFMIDQ63HM1 303 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 TIGD7Q6NT04 549 aaPredicted RBP25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 OTOP3Q7RTS5 596 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 MIB1Q86YT6 1006 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 C10orf67Q8IYJ2 551 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 FBXO22Q8NEZ5 403 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 PLCD4Q9BRC7 762 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 BEGAINQ9BUH8 593 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 VPS11Q9H270 941 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 KDM4CQ9H3R0 1056 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 NDFIP2Q9NV92 336 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 ARL2BPQ9Y2Y0 163 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 MRPL42Q9Y6G3 142 aaKnown RBP25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 RPS6KL1Q9Y6S9 549 aa25.2■■□□□ 1.62
DNMT3A-206ENST00000406659 AP3B1O00203 1094 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 MGAT5Q09328 741 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 IKBKEQ14164 716 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 PSMD5Q16401 504 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 USP41Q3LFD5 358 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 MROH9Q5TGP6 573 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 NAPEPLDQ6IQ20 393 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 LINC00523Q86TU6 105 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 CCT6BQ92526 530 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 SPOCK2Q92563 424 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 BTN2A3PQ96KV6 586 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 TOX2Q96NM4 488 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 IL12RB2Q99665 862 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 DONSONQ9NYP3 566 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 UBP1Q9NZI7 540 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 PHTF1Q9UMS5 762 aa25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 AAR2Q9Y312 384 aaKnown RBP25.19■■□□□ 1.62
DNMT3A-206ENST00000406659 SLC12A8A0AV02 714 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 WDR91A4D1P6 747 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 SLC38A8A6NNN8 435 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 RFPL1O75677 317 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 NEBLO76041 1014 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 RHOQP17081 205 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 LIG3P49916 1009 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 PAPOLAP51003 745 aaKnown RBP25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 MS4A13Q5J8X5 152 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 CES3Q6UWW8 571 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 RASSF3Q86WH2 238 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 FAM111AQ96PZ2 611 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 GLOD4Q9HC38 313 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 STARD13Q9Y3M8 1113 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 MAGEB16A2A368 324 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 ANXA9O76027 345 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 HMBSP08397 361 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 CCNFP41002 786 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 MAGEA9P43362 315 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 CGB2Q6NT52 195 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 ZNF449Q6P9G9 518 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 SRPK1Q96SB4 655 aaKnown RBP25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 APOL2Q9BQE5 337 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 ZYG11BQ9C0D3 744 aa25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 PPARGC1AQ9UBK2 798 aaKnown RBP25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 MAGED2Q9UNF1 606 aaPredicted RBP25.18■■□□□ 1.62
DNMT3A-206ENST00000406659 CACNG3O60359 315 aa25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 LACTB2Q53H82 288 aaPredicted RBP25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 CERCAMQ5T4B2 595 aa25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 PACS1Q6VY07 963 aa25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 TIFABQ6ZNK6 161 aa25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 TRPM8Q7Z2W7 1104 aa25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 ZNF683Q8IZ20 524 aa25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 ZNF784Q8NCA9 323 aaPredicted RBP25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 ZNF669Q96BR6 464 aaPredicted RBP25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 PPP1R2P1Q96PQ5 205 aa25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 FCRL5Q96RD9 977 aa25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 ACTR5Q9H9F9 607 aaPredicted RBP25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 PRDM5Q9NQX1 630 aaPredicted RBP25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 MTRRQ9UBK8 725 aa25.17■■□□□ 1.62
DNMT3A-206ENST00000406659 ADAM12O43184 909 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 ATP9BO43861 1147 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 EDF1O60869 148 aaKnown RBP25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 NDST2P52849 883 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 CDH17Q12864 832 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 ANO4Q32M45 955 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 CNKSR3Q6P9H4 555 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 KLHDC8BQ8IXV7 354 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 CERS2Q96G23 380 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 FCRL3Q96P31 734 aaPredicted RBP25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 SLC13A1Q9BZW2 595 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 IL22Q9GZX6 179 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 SLCO1B3Q9NPD5 702 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 RBM22Q9NW64 420 aaKnown RBP eCLIP25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 ZFATQ9P243 1243 aa25.16■■□□□ 1.62
DNMT3A-206ENST00000406659 TXNDC16Q9P2K2 825 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms