RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ILKAPQ9H0C8 392 aaPredicted RBP10.96□□□□□ -0.65
CLIP4-204ENST00000404424 NXF3Q9H4D5 531 aaKnown RBP10.96□□□□□ -0.65
CLIP4-204ENST00000404424 EBF3Q9H4W6 596 aa10.96□□□□□ -0.65
CLIP4-204ENST00000404424 PIDD1Q9HB75 910 aa10.96□□□□□ -0.65
CLIP4-204ENST00000404424 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.96□□□□□ -0.65
CLIP4-204ENST00000404424 ADAMTS6Q9UKP5 1117 aa10.96□□□□□ -0.65
CLIP4-204ENST00000404424 PRPF19Q9UMS4 504 aaKnown RBP10.96□□□□□ -0.65
CLIP4-204ENST00000404424 GINS2Q9Y248 185 aa10.96□□□□□ -0.65
CLIP4-204ENST00000404424 ANKRD6Q9Y2G4 727 aa10.96□□□□□ -0.65
CLIP4-204ENST00000404424 SCN4AP35499 1836 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 SYNJ2BP-COX16A0A087WUM0 186 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 KCNK1O00180 336 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 FBXO21O94952 628 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 C2P06681 752 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 MMP3P08254 477 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 CYP2B6P20813 491 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 DNAJB1P25685 340 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 ADSLP30566 484 aaPredicted RBP10.96□□□□□ -0.66
CLIP4-204ENST00000404424 SERPINB6P35237 376 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 ADRA1BP35368 520 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 ZNF135P52742 658 aaPredicted RBP10.96□□□□□ -0.66
CLIP4-204ENST00000404424 PITX1P78337 314 aaPredicted RBP10.96□□□□□ -0.66
CLIP4-204ENST00000404424 USP4Q13107 963 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 DGKDQ16760 1214 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 SLC9B1Q4ZJI4 515 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 ZNF618Q5T7W0 954 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 C16orf89Q6UX73 402 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 SDCCAG8Q86SQ7 713 aaPredicted RBP10.96□□□□□ -0.66
CLIP4-204ENST00000404424 SETD3Q86TU7 594 aaPredicted RBP10.96□□□□□ -0.66
CLIP4-204ENST00000404424 KCNMB4Q86W47 210 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 HPS6Q86YV9 775 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 SIX6OS1Q8N1H7 587 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 SHKBP1Q8TBC3 707 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 BTBD9Q96Q07 612 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 DDX50Q9BQ39 737 aaKnown RBP10.96□□□□□ -0.66
CLIP4-204ENST00000404424 GORASP1Q9BQQ3 440 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 MCMBPQ9BTE3 642 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 IL22Q9GZX6 179 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 GBA3Q9H227 469 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 TCF7L2Q9NQB0 619 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 OXSMQ9NWU1 459 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 COX16Q9P0S2 106 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 GJD2Q9UKL4 321 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 RAP2CQ9Y3L5 183 aa10.96□□□□□ -0.66
CLIP4-204ENST00000404424 RGSL1A5PLK6 1076 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 C9IYK1 514 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 E9PBE3 544 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 ZBTB14O43829 449 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 KLHL41O60662 606 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 RNASEH1O60930 286 aaKnown RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 DARSP14868 501 aaKnown RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 AKAP5P24588 427 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 GJA9P57773 515 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 SEMA3BQ13214 749 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 NME3Q13232 169 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 RBBP5Q15291 538 aaKnown RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 SFT2D3Q587I9 215 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 HSP90AA5PQ58FG0 334 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 NAPRTQ6XQN6 538 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 NETO2Q8NC67 525 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 GPRC5AQ8NFJ5 357 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 NDRG1Q92597 394 aaKnown RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 CCDC124Q96CT7 223 aaKnown RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 OPTNQ96CV9 577 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 HDAC11Q96DB2 347 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 AGAP3Q96P47 875 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 AGAP2Q99490 1192 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 SHCBP1LQ9BZQ2 653 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 TRIM4Q9C037 500 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 TMPRSS4Q9NRS4 437 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 PIGVQ9NUD9 493 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 C6orf203Q9P0P8 240 aaPredicted RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 STK39Q9UEW8 545 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 BCAP29Q9UHQ4 241 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 TBC1D30Q9Y2I9 924 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 SMIM35A0A1B0GVV1 85 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 SLCO1B7G3V0H7 640 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 MATN2O00339 956 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 RAG1P15918 1043 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 VCLP18206 1134 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 CSRP3P50461 194 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 TPI1P60174 286 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 GRM2Q14416 872 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 ARL13BQ3SXY8 428 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 DUSP28Q4G0W2 176 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 SYPL2Q5VXT5 272 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 LIPMQ5VYY2 423 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 TMEM126BQ8IUX1 230 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 RP9Q8TA86 221 aaKnown RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 AZIN2Q96A70 460 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 PGAP3Q96FM1 320 aaPredicted RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 ATXN7L3BQ96GX2 97 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 TSNARE1Q96NA8 513 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 LENG8Q96PV6 779 aaPredicted RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 OSMRQ99650 979 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 GATA5Q9BWX5 397 aaPredicted RBP10.95□□□□□ -0.66
CLIP4-204ENST00000404424 DRC3Q9H069 523 aa10.95□□□□□ -0.66
CLIP4-204ENST00000404424 FAM49AQ9H0Q0 323 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms