RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 NPM3O75607 178 aaKnown RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 MT-ND1P03886 318 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 NME3Q13232 169 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 ATP1A4Q13733 1029 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 MGAT5BQ3V5L5 792 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 BOLA3Q53S33 107 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 FASTKD5Q7L8L6 764 aaKnown RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 LHX5Q9H2C1 402 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 R3HDMLQ9H3Y0 253 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 NMRAL1Q9HBL8 299 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 CHRAC1Q9NRG0 131 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 MTMR10Q9NXD2 777 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 NDUFA13Q9P0J0 144 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 C6orf203Q9P0P8 240 aaPredicted RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 RSL24D1Q9UHA3 163 aaKnown RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 PPEF2O14830 753 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 CASQ2O14958 399 aaPredicted RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 DENRO43583 198 aaKnown RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 MFSD11O43934 449 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 YAP1P46937 504 aaKnown RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 SLC5A3P53794 718 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 DGKDQ16760 1214 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 SEL1L3Q68CR1 1132 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 POTEAQ6S8J7 498 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 CDKL3Q8IVW4 592 aaPredicted RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 ZBTB8OSQ8IWT0 167 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF513Q8N8E2 541 aaPredicted RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 GIPC3Q8TF64 312 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 KCTD4Q8WVF5 259 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 CERS2Q96G23 380 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 P2RY11Q96G91 374 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 CCDC28BQ9BUN5 200 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 KLHL8Q9P2G9 620 aaPredicted RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 CITO14578 2027 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 BCLAF3A2AJT9 711 aaKnown RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF839A8K0R7 811 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 CILPO75339 1184 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 VAPBO95292 243 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 NR1H2P55055 460 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 POU5F1BQ06416 359 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 PDAP1Q13442 181 aaKnown RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 HSDL1Q3SXM5 330 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 NBPF12Q5TAG4 269 aaPredicted RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 OR9I1Q8NGQ6 314 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 USP33Q8TEY7 942 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 CSPG4P5Q96PW8 444 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 KCTD15Q96SI1 283 aaPredicted RBP9.76□□□□□ -0.85
SMC1B-202ENST00000404354 NRBP2Q9NSY0 501 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF510Q9Y2H8 683 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 PCDHB12Q9Y5F1 795 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 E7ENX8 843 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 G3V2L1 256 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 AKAP10O43572 662 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 ENDOD1O94919 500 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 STAG3L1P0CL83 205 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 UBA1P22314 1058 aaKnown RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 CBX3Q13185 183 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 OGFOD2Q6N063 350 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 LRRC8EQ6NSJ5 796 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 SAMD7Q7Z3H4 446 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 CTU1Q7Z7A3 348 aaKnown RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 TTC30AQ86WT1 665 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 OR6B3Q8NGW1 331 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 URGCPQ8TCY9 931 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 COPS5Q92905 334 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 CDT1Q9H211 546 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 RUVBL2Q9Y230 463 aaKnown RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 NUP205Q92621 2012 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 SPATA31C2B4DYI2 1134 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 J3QRK9 145 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 GABBR2O75899 941 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 CCDC130P13994 396 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 TGM2P21980 687 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 NR4A1P22736 598 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 GP5P40197 560 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 BAG6P46379 1132 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 IFRD2Q12894 506 aaPredicted RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 PPP1R3AQ16821 1122 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 SOWAHAQ2M3V2 549 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 PIGGQ5H8A4 983 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 C16orf89Q6UX73 402 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 DLK2Q6UY11 383 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 IFNEQ86WN2 208 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 OFCC1Q8IZS5 231 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 LRRC43Q8N309 656 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 FBXL8Q96CD0 374 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 GJD4Q96KN9 370 aaPredicted RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 MRPL45Q9BRJ2 306 aaKnown RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 ACE2Q9BYF1 805 aaPredicted RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 DPEP3Q9H4B8 488 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 PRDM12Q9H4Q4 367 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 PTPRHQ9HD43 1115 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 EGFL7Q9UHF1 273 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 PLA2G6O60733 806 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 POLBP06746 335 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 HARS2P49590 506 aaKnown RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 MCCD1P59942 119 aaPredicted RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 NIPAL4Q0D2K0 466 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms