RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 SRSF6Q13247 344 aaKnown RBP9.6□□□□□ -0.87
NUP43-204ENST00000403890 BIRC3Q13489 604 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 NCOA4Q13772 614 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 MORC3Q14149 939 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 CLCA4Q14CN2 919 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 RRAGBQ5VZM2 374 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 ZCCHC8Q6NZY4 707 aaKnown RBP9.6□□□□□ -0.87
NUP43-204ENST00000403890 EFL1Q7Z2Z2 1120 aaKnown RBP9.6□□□□□ -0.87
NUP43-204ENST00000403890 TRIM69Q86WT6 500 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 STK40Q8N2I9 435 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 IFT43Q96FT9 208 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 EPSTI1Q96J88 318 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 ZSCAN31Q96LW9 406 aaPredicted RBP9.6□□□□□ -0.87
NUP43-204ENST00000403890 SEPT10Q9P0V9 454 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 PLEKHB1Q9UF11 243 aaPredicted RBP9.6□□□□□ -0.87
NUP43-204ENST00000403890 CCDC39Q9UFE4 941 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 ANAPC2Q9UJX6 822 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 ACSL6Q9UKU0 697 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 RP1P56715 2156 aa9.6□□□□□ -0.87
NUP43-204ENST00000403890 POLQO75417 2590 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 EME2A4GXA9 379 aaPredicted RBP9.59□□□□□ -0.87
NUP43-204ENST00000403890 PLD2O14939 933 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 GPR37O15354 613 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 TBL1XO60907 577 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 RTN2O75298 545 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 NEBLO76041 1014 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 LATS1O95835 1130 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 BMP15O95972 392 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 SRPRAP08240 638 aaKnown RBP9.59□□□□□ -0.87
NUP43-204ENST00000403890 MZF1P28698 734 aaPredicted RBP9.59□□□□□ -0.87
NUP43-204ENST00000403890 HOXD13P35453 343 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 DRD3P35462 400 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 CYP2J2P51589 502 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 SGSHP51688 502 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 HNRNPKP61978 463 aaKnown RBP eCLIP9.59□□□□□ -0.87
NUP43-204ENST00000403890 YWHAGP61981 247 aaKnown RBP eCLIP9.59□□□□□ -0.87
NUP43-204ENST00000403890 MANEAQ5SRI9 462 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 GUSBP11Q6P575 273 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 JAMLQ86YT9 394 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 MFN1Q8IWA4 741 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 XXYLT1Q8NBI6 393 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 TMEM145Q8NBT3 493 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 WDR48Q8TAF3 677 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 FIBINQ8TAL6 211 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 PTPRN2Q92932 1015 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 FAM131CQ96AQ9 280 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 LMLNQ96KR4 655 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 MRGPRX2Q96LB1 330 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
NUP43-204ENST00000403890 CALN1Q9BXU9 219 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 DUSP16Q9BY84 665 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 SLCO3A1Q9UIG8 710 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 INTS6Q9UL03 887 aaKnown RBP9.59□□□□□ -0.87
NUP43-204ENST00000403890 ERVW-1Q9UQF0 538 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 HBS1LQ9Y450 684 aaKnown RBP9.59□□□□□ -0.87
NUP43-204ENST00000403890 DOCK9Q9BZ29 2069 aa9.59□□□□□ -0.87
NUP43-204ENST00000403890 SLC31A1O15431 190 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 PLRG1O43660 514 aaKnown RBP9.58□□□□□ -0.88
NUP43-204ENST00000403890 LIPCP11150 499 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 AP3M2P53677 418 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 RIPPLY3P57055 190 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 CYP4F2P78329 520 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 ELAVL3Q14576 367 aaKnown RBP9.58□□□□□ -0.88
NUP43-204ENST00000403890 SGSM1Q2NKQ1 1148 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 ZNF542PQ5EBM4 170 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 PIK3R6Q5UE93 754 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 RFWD3Q6PCD5 774 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 CRTC1Q6UUV9 634 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 DSG4Q86SJ6 1040 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 CCDC65Q8IXS2 484 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 FBXO39Q8N4B4 442 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 OR13H1Q8NG92 308 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 FUCA2Q9BTY2 467 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 NT5C1AQ9BXI3 368 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 CAAP1Q9H8G2 361 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 AGPAT3Q9NRZ7 376 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 OLA1Q9NTK5 396 aaKnown RBP9.58□□□□□ -0.88
NUP43-204ENST00000403890 DNAJC28Q9NX36 388 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 STIM2Q9P246 746 aa9.58□□□□□ -0.88
NUP43-204ENST00000403890 ITIH6Q6UXX5 1313 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 FAM181BA6NEQ2 426 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 CLIC2O15247 247 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 NVLO15381 856 aaKnown RBP9.57□□□□□ -0.88
NUP43-204ENST00000403890 IRAK2O43187 625 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 TGFB1I1O43294 461 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 VNN1O95497 513 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 C4BPAP04003 597 aaKnown RBP9.57□□□□□ -0.88
NUP43-204ENST00000403890 RPN1P04843 607 aaKnown RBP9.57□□□□□ -0.88
NUP43-204ENST00000403890 AKT2P31751 481 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 UGT1A5P35504 534 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 CTSOP43234 321 aaPredicted RBP9.57□□□□□ -0.88
NUP43-204ENST00000403890 CASP4P49662 377 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 METAP1P53582 386 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 SNRPFP62306 86 aaKnown RBP9.57□□□□□ -0.88
NUP43-204ENST00000403890 ECT2LQ008S8 904 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 EIF3IQ13347 325 aaKnown RBP9.57□□□□□ -0.88
NUP43-204ENST00000403890 SPIDRQ14159 915 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 NR0B2Q15466 257 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 FAM46CQ5VWP2 391 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms