RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 TARSL2A2RTX5 802 aaKnown RBP4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 PGPEP1LA6NFU8 196 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 BTBD19C9JJ37 291 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 TMEM232C9JQI7 657 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 POC1B-GALNT4F8VUJ3 575 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 UBE2Q2LH0YL09 131 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 SNAP23O00161 211 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 C1QL1O75973 258 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 CYP2A6P11509 494 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 TNNT1P13805 278 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 HOXB9P17482 250 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 DCAF7P61962 342 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 FHL2Q14192 279 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 TBCEQ15813 527 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 PROSER3Q2NL68 480 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 DSTYKQ6XUX3 929 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 GALNT7Q86SF2 657 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 ARMC8Q8IUR7 673 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 SETD9Q8NE22 299 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 CENPIQ92674 756 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 CD180Q99467 661 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 SCNM1Q9BWG6 230 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 TTC12Q9H892 705 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 Q9N2J8 555 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 TXNRD2Q9NNW7 524 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 NLKQ9UBE8 527 aa4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 ARPP21Q9UBL0 812 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 EMSYQ7Z589 1322 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 TSPAN4O14817 238 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 CEP104O60308 925 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 USO1O60763 962 aaKnown RBP4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 FZD7O75084 574 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 TULP3O75386 442 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 RNASEH2AO75792 299 aaKnown RBP4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 FSHBP01225 129 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 LDHCP07864 332 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 FCGR2AP12318 317 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 AKR1A1P14550 325 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 EDN2P20800 178 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 EPHA8P29322 1005 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 MAPK4P31152 587 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 HOXA7P31268 230 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 POLD2P49005 469 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 ZXDAP98168 799 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 RHAGQ02094 409 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 TFF2Q03403 129 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 DCTN2Q13561 401 aaKnown RBP4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 CAMK1Q14012 370 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 SEMA3AQ14563 771 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 TOMM20Q15388 145 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC18A3Q16572 532 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 PRICKLE4Q2TBC4 344 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC9B1Q4ZJI4 515 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 ZNF766Q5HY98 468 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 PCSK4Q6UW60 755 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 ATF7IPQ6VMQ6 1270 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 RBM44Q6ZP01 1051 aaKnown RBP4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 MOB3CQ70IA8 216 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 PCGF5Q86SE9 256 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 MRGPRGQ86SM5 289 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 ARL14EPQ8N8R7 260 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 SCAIQ8N9R8 606 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 OR52N4Q8NGI2 321 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 RAB40AQ8WXH6 277 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 NCSTNQ92542 709 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 CNOT9Q92600 299 aaKnown RBP4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 C5orf34Q96MH7 638 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 C7orf26Q96N11 449 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 ASB2Q96Q27 587 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 PRRX2Q99811 253 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 CXorf56Q9H5V9 222 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 PLEKHA5Q9HAU0 1116 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 VEZTQ9HBM0 779 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 ZNF304Q9HCX3 659 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 PDGFCQ9NRA1 345 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 KRT84Q9NSB2 600 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 KLHL13Q9P2N7 655 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 PEMTQ9UBM1 199 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 CTNNAL1Q9UBT7 734 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC25A10Q9UBX3 287 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 DTX4Q9Y2E6 619 aa4.22□□□□□ -1.73
HMGB1P17-201ENST00000403495 AOX1Q06278 1338 aa4.21□□□□□ -1.73
HMGB1P17-201ENST00000403495 A6NCN8 305 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 PABPN1LA6NDY0 278 aaKnown RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 MANSC4A6NHS7 340 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 LDLRAD4O15165 306 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 INPPL1O15357 1258 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 MSI1O43347 362 aaKnown RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 EIF5BO60841 1220 aaKnown RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 GUCY1B2O75343 617 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 GFPT2O94808 682 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 PLAUP00749 431 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 WT1P19544 449 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 ICAM3P32942 547 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 EFNA5P52803 228 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 PROK1P58294 105 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 UFM1P61960 85 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 COL10A1Q03692 680 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 ERV3-1Q14264 604 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms