RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 ZNF18P17022 549 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 NUDT1P36639 197 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 MTIF2P46199 727 aaKnown RBP12.73□□□□□ -0.37
PRAME-204ENST00000403441 ACADVLP49748 655 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 NXPH1P58417 271 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 KCNMA1Q12791 1236 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 SLC12A1Q13621 1099 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 NCAPHQ15003 741 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 SHBQ15464 509 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 STX1AQ16623 288 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 TPD52L1Q16890 204 aaPredicted RBP12.73□□□□□ -0.37
PRAME-204ENST00000403441 TTC39BQ5VTQ0 682 aaPredicted RBP12.73□□□□□ -0.37
PRAME-204ENST00000403441 RAP1GAP2Q684P5 730 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 TBC1D3GQ6DHY5 549 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 TBC1D3CQ6IPX1 549 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 NAPEPLDQ6IQ20 393 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 LRRC69Q6ZNQ3 347 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 BEND5Q7L4P6 421 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 TBC1D3Q8IZP1 549 aaPredicted RBP12.73□□□□□ -0.37
PRAME-204ENST00000403441 PIP4K2CQ8TBX8 421 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 SLC39A13Q96H72 371 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 RPL10LQ96L21 214 aaKnown RBP12.73□□□□□ -0.37
PRAME-204ENST00000403441 BBC3Q96PG8 261 aaPredicted RBP12.73□□□□□ -0.37
PRAME-204ENST00000403441 UBL7Q96S82 380 aaPredicted RBP12.73□□□□□ -0.37
PRAME-204ENST00000403441 FAM129BQ96TA1 746 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 FUCA2Q9BTY2 467 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 ERVMER34-1Q9H9K5 563 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 EBF2Q9HAK2 575 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 SLCO3A1Q9UIG8 710 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 AK5Q9Y6K8 562 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 NYNRINQ9P2P1 1898 aaKnown RBP12.73□□□□□ -0.37
PRAME-204ENST00000403441 KNTC1P50748 2209 aa12.73□□□□□ -0.37
PRAME-204ENST00000403441 RRP8O43159 456 aaKnown RBP12.72□□□□□ -0.37
PRAME-204ENST00000403441 SLC7A4O43246 635 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 MED7O43513 233 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 LATO43561 262 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 MAGEC1O60732 1142 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 CALCAP01258 141 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 KRT5P13647 590 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 TACR2P21452 398 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 STK19P49842 368 aaPredicted RBP12.72□□□□□ -0.37
PRAME-204ENST00000403441 OXCT1P55809 520 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 SEMG2Q02383 582 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 APBA1Q02410 837 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 ILKQ13418 452 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 KLHL40Q2TBA0 621 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 ZC3H12AQ5D1E8 599 aaKnown RBP12.72□□□□□ -0.37
PRAME-204ENST00000403441 RABGAP1LQ5R372 815 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 HES3Q5TGS1 186 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 SASS6Q6UVJ0 657 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 APTXQ7Z2E3 356 aaKnown RBP12.72□□□□□ -0.37
PRAME-204ENST00000403441 PRPF39Q86UA1 669 aaKnown RBP12.72□□□□□ -0.37
PRAME-204ENST00000403441 APCDD1Q8J025 514 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 ATP6V0D2Q8N8Y2 350 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 MFSD2AQ8NA29 543 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 SPAG5Q96R06 1193 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 PPP1R9BQ96SB3 815 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 BPIFA3Q9BQP9 254 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 CRACR2AQ9BSW2 395 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 NAA15Q9BXJ9 866 aaKnown RBP12.72□□□□□ -0.37
PRAME-204ENST00000403441 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 POPDC2Q9HBU9 364 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 UBE2TQ9NPD8 197 aaPredicted RBP12.72□□□□□ -0.37
PRAME-204ENST00000403441 SLC12A6Q9UHW9 1150 aa12.72□□□□□ -0.37
PRAME-204ENST00000403441 XPO7Q9UIA9 1087 aaKnown RBP12.72□□□□□ -0.37
PRAME-204ENST00000403441 AJAP1Q9UKB5 411 aaPredicted RBP12.72□□□□□ -0.37
PRAME-204ENST00000403441 A0A1B0GVM2 712 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 TCAF2A6NFQ2 919 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 LRRC10BA6NIK2 292 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 C10orf142B7Z368 130 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 WNT9AO14904 365 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 SLC2A3P11169 496 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 PDGFRAP16234 1089 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 GPD2P43304 727 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 RXRGP48443 463 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 CLDN6P56747 220 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 PPP2CBP62714 309 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 YWHAZP63104 245 aaKnown RBP12.71□□□□□ -0.37
PRAME-204ENST00000403441 PPP2CAP67775 309 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 MYL5Q02045 173 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 TYRO3Q06418 890 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 OVGP1Q12889 678 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 TARDBPQ13148 414 aaKnown RBP eCLIP12.71□□□□□ -0.37
PRAME-204ENST00000403441 SFMBT2Q5VUG0 894 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 FAM46CQ5VWP2 391 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 SYPL2Q5VXT5 272 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 FBXL19Q6PCT2 694 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 GJB7Q6PEY0 223 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.71□□□□□ -0.37
PRAME-204ENST00000403441 IQCHQ86VS3 1027 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 STK32AQ8WU08 396 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 OR8D1Q8WZ84 308 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 BAP1Q92560 729 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 TSC1Q92574 1164 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 PTPRN2Q92932 1015 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 CRELD1Q96HD1 420 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 NRSN2Q9GZP1 204 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 FAM204AQ9H8W3 233 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms