RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 DNAAF3Q8N9W5 541 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 RBM15BQ8NDT2 890 aaKnown RBP13.3□□□□□ -0.28
PRAME-203ENST00000402697 LRRN4Q8WUT4 740 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 ZNF669Q96BR6 464 aaPredicted RBP13.3□□□□□ -0.28
PRAME-203ENST00000402697 SNX15Q9NRS6 342 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 FAM105AQ9NUU6 356 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 DDIT4Q9NX09 232 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 GABRQQ9UN88 632 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 ZCWPW2A0A1B0GU75 182 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 TMEM88BA6NKF7 163 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 YJEFN3A6XGL0 299 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 NRP1O14786 923 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 SLC22A2O15244 555 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 CYP11A1P05108 521 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 ODC1P11926 461 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 CCNCP24863 283 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 ADSLP30566 484 aaPredicted RBP13.3□□□□□ -0.28
PRAME-203ENST00000402697 FCGRTP55899 365 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 ACTR3P61158 418 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 RPL10AP62906 217 aaKnown RBP13.3□□□□□ -0.28
PRAME-203ENST00000402697 PITX1P78337 314 aaPredicted RBP13.3□□□□□ -0.28
PRAME-203ENST00000402697 ASPHQ12797 758 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 TUBB3Q13509 450 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 RCN1Q15293 331 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 CES4AQ5XG92 561 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 RFWD3Q6PCD5 774 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 STRA8Q7Z7C7 330 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 CLEC14AQ86T13 490 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 OR52K1Q8NGK4 314 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 PCED1BQ96HM7 432 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 ZNF333Q96JL9 665 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 TRIM56Q9BRZ2 755 aaKnown RBP13.3□□□□□ -0.28
PRAME-203ENST00000402697 KIFC1Q9BW19 673 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 MRGBPQ9NV56 204 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 ARMCX1Q9P291 453 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 LRCH1Q9Y2L9 728 aa13.3□□□□□ -0.28
PRAME-203ENST00000402697 HHLA1C9JL84 531 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 SLCO1B7G3V0H7 640 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 GPR182O15218 404 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 FGF10O15520 208 aaPredicted RBP13.29□□□□□ -0.28
PRAME-203ENST00000402697 ZNF623O75123 536 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 DUSP11O75319 330 aaKnown RBP13.29□□□□□ -0.28
PRAME-203ENST00000402697 ANXA9O76027 345 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 IBSPP21815 317 aaPredicted RBP13.29□□□□□ -0.28
PRAME-203ENST00000402697 ACAT1P24752 427 aaKnown RBP13.29□□□□□ -0.28
PRAME-203ENST00000402697 MLH1P40692 756 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 AP2B1P63010 937 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 CAP1Q01518 475 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 MPP3Q13368 585 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 TMCO4Q5TGY1 634 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 SNX30Q5VWJ9 437 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 IRGCQ6NXR0 463 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 HFE2Q6ZVN8 426 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 DCLK2Q8N568 766 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 NDRG1Q92597 394 aaKnown RBP13.29□□□□□ -0.28
PRAME-203ENST00000402697 JADE3Q92613 823 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 PRR11Q96HE9 360 aaPredicted RBP13.29□□□□□ -0.28
PRAME-203ENST00000402697 TSNARE1Q96NA8 513 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 HAPLN3Q96S86 360 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 MCMBPQ9BTE3 642 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 C20orf27Q9GZN8 174 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 MRM3Q9HC36 420 aaKnown RBP13.29□□□□□ -0.28
PRAME-203ENST00000402697 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
PRAME-203ENST00000402697 OR12D3Q9UGF7 316 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 PSAT1Q9Y617 370 aa13.29□□□□□ -0.28
PRAME-203ENST00000402697 KCNK1O00180 336 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 ZBTB24O43167 697 aaPredicted RBP13.28□□□□□ -0.28
PRAME-203ENST00000402697 TRIM13O60858 407 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 ERVK-10P10266 1014 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 KITP10721 976 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 COPAP53621 1224 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 ALDH18A1P54886 795 aaKnown RBP13.28□□□□□ -0.28
PRAME-203ENST00000402697 CRADDP78560 199 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 LBRQ14739 615 aaKnown RBP13.28□□□□□ -0.28
PRAME-203ENST00000402697 ANO4Q32M45 955 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 KIAA0319Q5VV43 1072 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 BSPRYQ5W0U4 402 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 FSTL4Q6MZW2 842 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 LRRC74BQ6ZQY2 392 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 KCNMB4Q86W47 210 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 C10orf107Q8IVU9 208 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 ULK2Q8IYT8 1036 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 GSTCDQ8NEC7 633 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 GABPB2Q8TAK5 448 aaPredicted RBP13.28□□□□□ -0.28
PRAME-203ENST00000402697 DPF3Q92784 378 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 FAM161BQ96MY7 647 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 UROC1Q96N76 676 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 FCRL3Q96P31 734 aaPredicted RBP13.28□□□□□ -0.28
PRAME-203ENST00000402697 SORT1Q99523 831 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 MTG1Q9BT17 334 aaPredicted RBP13.28□□□□□ -0.28
PRAME-203ENST00000402697 TMEM216Q9P0N5 145 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 FNDC1Q4ZHG4 1894 aaPredicted RBP13.28□□□□□ -0.28
PRAME-203ENST00000402697 THSD7BQ9C0I4 1608 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 SYNJ2BP-COX16A0A087WUM0 186 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 C2orf71A6NGG8 1288 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 ARHGAP42A6NI28 874 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 PRR5-ARHGAP8B1AHC4 643 aa13.28□□□□□ -0.28
PRAME-203ENST00000402697 PRKCGP05129 697 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms