RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 ACADSBP45954 432 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 AQP4P55087 323 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 CDC16Q13042 620 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 SEMA5AQ13591 1074 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 PRPSAP1Q14558 356 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 DCAF4L1Q3SXM0 396 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 ARL13BQ3SXY8 428 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 SLC25A52Q3SY17 297 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 NAPRTQ6XQN6 538 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 NET1Q7Z628 596 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 MAPK15Q8TD08 544 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 WNT8BQ93098 351 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 VPS39Q96JC1 886 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 C16orf70Q9BSU1 422 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 GATA5Q9BWX5 397 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 COPS7BQ9H9Q2 264 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 CPA4Q9UI42 421 aa12.93□□□□□ -0.34
PPP4R1-202ENST00000400555 TRIM13O60858 407 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 COX4I1P13073 169 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 TPSB2P20231 275 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 BDNFP23560 247 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 SNAPC2Q13487 334 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 GRM3Q14832 879 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 TPSAB1Q15661 275 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 TEX44Q53QW1 395 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 NOMO2Q5JPE7 1267 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 LDB1Q86U70 411 aaPredicted RBP12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 ICA1LQ8NDH6 482 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 SEMA6AQ9H2E6 1030 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 GJD2Q9UKL4 321 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 CDY2AQ9Y6F7 541 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 CDY1Q9Y6F8 540 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 POLR2AP24928 1970 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 MYOCOSA0A1B0GUC4 107 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 CXCL11O14625 94 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 B3GAT3O94766 335 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 CD4P01730 458 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 LYNP07948 512 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 HMBSP08397 361 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 SETSIPP0DME0 302 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 SMIM10L2AP0DMW4 78 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 SMIM10L2BP0DMW5 78 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 ARSAP15289 507 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 NPR3P17342 541 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 FGFR3P22607 806 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 ADRA1BP35368 520 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 GRIA4P48058 902 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 LILRA4P59901 499 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 ACTR3P61158 418 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 MPP1Q00013 466 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 FLOT2Q14254 428 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 CSHL1Q14406 222 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 ANKRD20A4Q4UJ75 823 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 LRRC8BQ6P9F7 803 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 SNX27Q96L92 541 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 CCDC106Q9BWC9 280 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 FTHL17Q9BXU8 183 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 FZD10Q9ULW2 581 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 COL11A1P12107 1806 aaPredicted RBP12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 TTC24A2A3L6 582 aaPredicted RBP12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 SERPINB8P50452 374 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 CNGA3Q16281 694 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 TFAP2DQ7Z6R9 452 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 PSTKQ8IV42 348 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 RCN3Q96D15 328 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 FICDQ9BVA6 458 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 ACE2Q9BYF1 805 aaPredicted RBP12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 CDH22Q9UJ99 828 aa12.92□□□□□ -0.34
PPP4R1-202ENST00000400555 A0A088AWK7 358 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 C9JVG2 144 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 CSPG5O95196 566 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 PTPN3P26045 913 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 ARRB2P32121 409 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 NOS2P35228 1153 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 ETFBP38117 255 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 SV2CQ496J9 727 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 SFT2D3Q587I9 215 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 NOL9Q5SY16 702 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 SDHAF4Q5VUM1 108 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 TAPT1Q6NXT6 567 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 ACAD11Q709F0 780 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 ST13P4Q8IZP2 240 aaPredicted RBP12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 CXorf38Q8TB03 319 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 ARNTL2Q8WYA1 636 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 PABPC5Q96DU9 382 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 SENP8Q96LD8 212 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 TLE6Q9H808 572 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 S100A14Q9HCY8 104 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 PNPLA8Q9NP80 782 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 CLIC5Q9NZA1 410 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 MOCS1Q9NZB8 636 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 BIRC5O15392 142 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 TPST1O60507 370 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 GRK2P25098 689 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 CASP2P42575 452 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 PTPN9P43378 593 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 MCCD1P59942 119 aaPredicted RBP12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 KLF10Q13118 480 aa12.91□□□□□ -0.34
PPP4R1-202ENST00000400555 FBXO48Q5FWF7 155 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms