RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 PDK1Q15118 436 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 PROX2Q3B8N5 592 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 PARP15Q460N3 678 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 MANEALQ5VSG8 457 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 PAPD7Q5XG87 772 aaKnown RBP9.15□□□□□ -0.94
BRCC3-206ENST00000399042 DARS2Q6PI48 645 aaKnown RBP9.15□□□□□ -0.94
BRCC3-206ENST00000399042 ZNF852Q6ZMS4 543 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 TPRG1Q6ZUI0 275 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 BBS12Q6ZW61 710 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 GSTA5Q7RTV2 222 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 ANKS1BQ7Z6G8 1248 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 ZC3H18Q86VM9 953 aaKnown RBP9.15□□□□□ -0.94
BRCC3-206ENST00000399042 RALGPS2Q86X27 583 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-206ENST00000399042 VSIG1Q86XK7 387 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 SLC13A5Q86YT5 568 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-206ENST00000399042 UBALD2Q8IYN6 164 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 AHI1Q8N157 1196 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 PLD5Q8N7P1 536 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 NETO2Q8NC67 525 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 FAM71BQ8TC56 605 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 COG1Q8WTW3 980 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 TSC1Q92574 1164 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 MS4A14Q96JA4 679 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 UHRF1Q96T88 793 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-206ENST00000399042 P2RY13Q9BPV8 354 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 C2orf49Q9BVC5 232 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-206ENST00000399042 MAGEH1Q9H213 219 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 MFSD1Q9H3U5 465 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 HOMER3Q9NSC5 361 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 ETNK2Q9NVF9 386 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 HAUS2Q9NVX0 235 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 SLC25A13Q9UJS0 675 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 DUSP12Q9UNI6 340 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 PLA2G4CQ9UP65 541 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 SLC8A2Q9UPR5 921 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 EFR3BQ9Y2G0 817 aa9.15□□□□□ -0.94
BRCC3-206ENST00000399042 MRPS17Q9Y2R5 130 aaKnown RBP9.15□□□□□ -0.94
BRCC3-206ENST00000399042 NOTCH4Q99466 2003 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 OTOL1A6NHN0 477 aaPredicted RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 WASH4PA8MWX3 477 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 CES2O00748 559 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 DCLK1O15075 740 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 ZNF185O15231 689 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 ZNF500O60304 480 aaPredicted RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 CACNG3O60359 315 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 KAT7O95251 611 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 GLULP15104 373 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 PRLRP16471 622 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 HOXC13P31276 330 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 CD70P32970 193 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 PTPN7P35236 360 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 ACTN2P35609 894 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 PAPOLAP51003 745 aaKnown RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 GALK1P51570 392 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 EIF3EP60228 445 aaKnown RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 OTUD4Q01804 1114 aaKnown RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 GBE1Q04446 702 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 SULT2A1Q06520 285 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 CKAP4Q07065 602 aaKnown RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 ITKQ08881 620 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 LMAN2Q12907 356 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 SNX1Q13596 522 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 TUBB2AQ13885 445 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 DMC1Q14565 340 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 PON2Q15165 354 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 E2F5Q15329 346 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 MLF2Q15773 248 aaPredicted RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 C5orf22Q49AR2 442 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 ACCSLQ4AC99 568 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 DCAF12L1Q5VU92 463 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 NCBP2-AS2Q69YL0 99 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 SDE2Q6IQ49 451 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 RETSATQ6NUM9 610 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 NPNTQ6UXI9 565 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 ZNF783Q6ZMS7 281 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 NLRP14Q86W24 1093 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 SUGP1Q8IWZ8 645 aaKnown RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 ZNF683Q8IZ20 524 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 UMODL1-AS1Q8N2C9 162 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 BBS5Q8N3I7 341 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 PQLC3Q8N755 202 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 PAF1Q8N7H5 531 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 OR7D4Q8NG98 312 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 CCDC26Q8TAB7 109 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 WFIKKN2Q8TEU8 576 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 TFB1MQ8WVM0 346 aaKnown RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 FAM3CQ92520 227 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 FAF2Q96CS3 445 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 HMCESQ96FZ2 354 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 MSANTD3Q96H12 275 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 CCDC114Q96M63 670 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 NECAB3Q96P71 396 aaPredicted RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 FAM118BQ9BPY3 351 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 TUBB2BQ9BVA1 445 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 AP1M1Q9BXS5 423 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 SLC39A8Q9C0K1 460 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 TRPV5Q9NQA5 729 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 SLC2A4RGQ9NR83 387 aa9.14□□□□□ -0.95
BRCC3-206ENST00000399042 SAE1Q9UBE0 346 aaPredicted RBP9.14□□□□□ -0.95
BRCC3-206ENST00000399042 RNF14Q9UBS8 474 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms