RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ZXDBP98169 803 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 XRCC4Q13426 336 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 TEAD2Q15562 447 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 SLC5A9Q2M3M2 681 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 ARHGAP15Q53QZ3 475 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 SWT1Q5T5J6 900 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 GPR158Q5T848 1215 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 TMC5Q6UXY8 1006 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 NETO2Q8NC67 525 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 RSAD2Q8WXG1 361 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 SMG7Q92540 1137 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 NSUN3Q9H649 340 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 MPP6Q9NZW5 540 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 ANAPC5Q9UJX4 755 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 CLUHO75153 1309 aa19.82■□□□□ 0.76
PDLIM2-204ENST00000397760 IGLV3-10A0A075B6K4 115 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 RASSF9O75901 435 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 DDX6P26196 483 aaKnown RBP eCLIP19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 SERPINB6P35237 376 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 FBXW10Q5XX13 1052 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 EXOC3L1Q86VI1 746 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 NPWQ8N729 165 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 ADAMTS19Q8TE59 1207 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 IGSF8Q969P0 613 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 OLFM3Q96PB7 478 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 ZYG11BQ9C0D3 744 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 SFXN1Q9H9B4 322 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 SAMD15Q9P1V8 674 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 AGO1Q9UL18 857 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 ACTL7BQ9Y614 415 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 TNRC18O15417 2968 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 F5H5T6 163 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 ZNF197O14709 1029 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 IFNB1P01574 187 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 STIP1P31948 543 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 ITGA8P53708 1063 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 PDK1Q15118 436 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 FAM133BQ5BKY9 247 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 TCEAL5Q5H9L2 206 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 PRSS36Q5K4E3 855 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 PRUNE1Q86TP1 453 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 CCDC25Q86WR0 208 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 CDKL3Q8IVW4 592 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 TP53INP2Q8IXH6 220 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 FAM71DQ8N9W8 422 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 LRRN4Q8WUT4 740 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 RPRD1AQ96P16 312 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 CCDC77Q9BR77 488 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 TASP1Q9H6P5 420 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 DZANK1Q9NVP4 752 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 LGALS13Q9UHV8 139 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 RAD54BQ9Y620 910 aa19.81■□□□□ 0.76
PDLIM2-204ENST00000397760 BCLAF3A2AJT9 711 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 CCT8L1PA6NM43 557 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 DRGXA6NNA5 263 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 WASH4PA8MWX3 477 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 RHOQP17081 205 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 RBL1P28749 1068 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 SLC6A4P31645 630 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 GDF10P55107 478 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 HYAL1Q12794 435 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 SLC45A4Q5BKX6 768 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 RFWD3Q6PCD5 774 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 LGI2Q8N0V4 545 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 RIBC1Q8N443 379 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 RTL3Q8N8U3 475 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 GLIS1Q8NBF1 620 aa19.8■□□□□ 0.76
PDLIM2-204ENST00000397760 CFAP69A5D8W1 941 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 HACD1B0YJ81 288 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 GREM1O60565 184 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 DNAJC8O75937 253 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 PAPLNO95428 1278 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 ABHD2P08910 425 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 ZSCAN5DPP0CG00 497 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 ETS1P14921 441 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 AVPR1AP37288 418 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 ADCY8P40145 1251 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 STAT4Q14765 748 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 ADGRF1Q5T601 910 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 CMTM8Q8IZV2 173 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 LZTR1Q8N653 840 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 TTC16Q8NEE8 873 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 TFB1MQ8WVM0 346 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 ARHGEF2Q92974 986 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 MYEOVQ96EZ4 313 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 CELF6Q96J87 481 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 QKIQ96PU8 341 aaKnown RBP eCLIP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 DDX50Q9BQ39 737 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 KLC2Q9H0B6 622 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 PRDM12Q9H4Q4 367 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 USP29Q9HBJ7 922 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 ANAPC1Q9H1A4 1944 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 SMIM23A6NLE4 172 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 SOBPA7XYQ1 873 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 PPP1R12AO14974 1030 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 KCNN4O15554 427 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 CNTN5O94779 1100 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 LATS1O95835 1130 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 VPS41P49754 854 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 LRIT3Q3SXY7 679 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms