RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 C15orf38-AP3S2A0A0A6YYH1 394 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TAF4O00268 1085 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 HDAC3O15379 428 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 RPLP2P05387 115 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 FGFR3P22607 806 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ATP13A4Q4VNC1 1196 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 HEATR6Q6AI08 1181 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ARPINQ7Z6K5 226 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF410Q86VK4 478 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ARFGAP1Q8N6T3 406 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 HPS1Q92902 700 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 QTRT2Q9H974 415 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 BLOC1S6Q9UL45 172 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 DMTF1Q9Y222 760 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 A0A1W2PPM1 405 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TRIM13O60858 407 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 MFN2O95140 757 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 THRAP10827 490 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 FGFR1P11362 822 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF23P17027 643 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ASPAP45381 313 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SLC6A3Q01959 620 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ATF7IP2Q5U623 682 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 LIMS2Q7Z4I7 341 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM135Q86UB9 458 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 RBM15BQ8NDT2 890 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TSPAN14Q8NG11 270 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 MYOZ2Q9NPC6 264 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SNTG2Q9NY99 539 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 VTI1BQ9UEU0 232 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SIX4Q9UIU6 781 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PTBP2Q9UKA9 531 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SH3BP1Q9Y3L3 701 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 NR2E3Q9Y5X4 410 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF541Q9H0D2 1346 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PSMD3O43242 534 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 C7P10643 843 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 CLK1P49759 484 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PTK2BQ14289 1009 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 LPIN1Q14693 890 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SHROOM1Q2M3G4 852 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SMTNL2Q2TAL5 461 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PKDCCQ504Y2 493 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 UBAP2Q5T6F2 1119 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 RFWD3Q6PCD5 774 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ZCCHC23Q6ZST2 131 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 CAND1Q86VP6 1230 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 UNC45BQ8IWX7 931 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 LINC01465Q8N7H1 131 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 C1orf127Q8N9H9 656 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PTCD2Q8WV60 388 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SYT15Q9BQS2 421 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 BBS2Q9BXC9 721 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 CDK5RAP2Q96SN8 1893 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 MATN2O00339 956 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 LINGO3P0C6S8 592 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 HLA-DPA1P20036 260 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PPARGP37231 505 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PSMD8P48556 350 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 CDC16Q13042 620 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 CAPRIN1Q14444 709 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 NRF1Q16656 503 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 FAM102AQ5T9C2 384 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ITPRIPL1Q6GPH6 555 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 LINC00299Q6ZSB3 139 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TAS2R42Q7RTR8 314 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ALYREFQ86V81 257 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ULK2Q8IYT8 1036 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ZCCHC7Q8N3Z6 543 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 DGCR14Q96DF8 476 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF560Q96MR9 790 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ZBTB18Q99592 522 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 GLIS2Q9BZE0 524 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PREBQ9HCU5 417 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 MORF4L1Q9UBU8 362 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 NKX1-2Q9UD57 310 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 CLRN2A0PK11 232 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 MYO1GB0I1T2 1018 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 C9IYK1 514 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 APOL1O14791 398 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 ALBP02768 609 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PROCP04070 461 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 GRM5P41594 1212 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 NR1H2P55055 460 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 GJA9P57773 515 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 MRPS22P82650 360 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PRKAA1Q13131 559 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 TMTC4Q5T4D3 741 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 BNIPLQ7Z465 357 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 ANKRD13AQ8IZ07 590 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 CNTD1Q8N815 330 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 TSPEARQ8WU66 669 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 SPOCK2Q92563 424 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 NT5C3BQ969T7 300 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 LRRC40Q9H9A6 602 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 COG4Q9H9E3 785 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 SYBUQ9NX95 663 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PTTG2Q9NZH5 202 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 CIDEBQ9UHD4 219 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 ASB14A6NK59 587 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms