RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 GRM6O15303 877 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 AGBL2Q5U5Z8 902 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 OVCA2Q8WZ82 227 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 HERC2P3Q9BVR0 1158 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 DRC3Q9H069 523 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 ZFP14Q9HCL3 533 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 FZD10Q9ULW2 581 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 NCKAP1Q9Y2A7 1128 aa8.45□□□□□ -1.06
PTPRD-204ENST00000397606 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 PRR23AA6NEV1 266 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 RHOBTB1O94844 696 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 GFAPP14136 432 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 PSMB4P28070 264 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 RPL22P35268 128 aaKnown RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 DRG2P55039 364 aaKnown RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SYPL2Q5VXT5 272 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 USP45Q70EL2 814 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 PLD5Q8N7P1 536 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 CXorf38Q8TB03 319 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ING5Q8WYH8 240 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ZIM3Q96PE6 472 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ARHGEF4Q9NR80 690 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 DZANK1Q9NVP4 752 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SLC39A10Q9ULF5 831 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 GJB5O95377 273 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 PGAM1P18669 254 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 NFKB1P19838 968 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 CNTFP26441 200 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 CTGFP29279 349 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ELK3P41970 407 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 GABRB2P47870 512 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 CYP4F8P98187 520 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 LRRC26Q2I0M4 334 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ZCCHC9Q8N567 271 aaKnown RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 CAVIN3Q969G5 261 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SH3KBP1Q96B97 665 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 MTBPQ96DY7 904 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SEMA3CQ99985 751 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 IL22Q9GZX6 179 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 CLPBQ9H078 707 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 MAGEH1Q9H213 219 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 C10orf88Q9H8K7 445 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ETNK1Q9HBU6 452 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 HACD3Q9P035 362 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 FIS1Q9Y3D6 152 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 NRIP1P48552 1158 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SERPINH1P50454 418 aaKnown RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 MAP7Q14244 749 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 DSC3Q14574 896 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 FBXL19Q6PCT2 694 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 KIRREL3Q8IZU9 778 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 OR2W6PQ8NHA6 318 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 P2RY11Q96G91 374 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SGSM3Q96HU1 749 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 CEP295NLQ96MC4 621 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SMOC2Q9H3U7 446 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ANKZF1Q9H8Y5 726 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 DUS2Q9NX74 493 aaKnown RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 GRID1Q9ULK0 1009 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 C1QTNF3-AMACRE9PGA6 284 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 GOLGA8RI6L899 631 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 MAP3K7O43318 606 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SPAG7O75391 227 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 VPS26AO75436 327 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SRP72O76094 671 aaKnown RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 PCDH8O95206 1070 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ZSCAN5DPP0CG00 497 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SP100P23497 879 aaPredicted RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 CD86P42081 329 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 LBRQ14739 615 aaKnown RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ZBTB6Q15916 424 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 DPYSL2Q16555 572 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 MROH9Q5TGP6 573 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 RFWD3Q6PCD5 774 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 GLT6D1Q7Z4J2 308 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SLC26A11Q86WA9 606 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 RTL3Q8N8U3 475 aaKnown RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 OR10T2Q8NGX3 314 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 KBTBD7Q8WVZ9 684 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 KCNN1Q92952 543 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 NKD2Q969F2 451 aaPredicted RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 TRIM55Q9BYV6 548 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 ZDHHC6Q9H6R6 413 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 CLDND1Q9NY35 253 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 PLK2Q9NYY3 685 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 SLC24A2Q9UI40 661 aa8.44□□□□□ -1.06
PTPRD-204ENST00000397606 AGO1Q9UL18 857 aaKnown RBP8.44□□□□□ -1.06
PTPRD-204ENST00000397606 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.43□□□□□ -1.06
PTPRD-204ENST00000397606 TPH1P17752 444 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 FSHRP23945 695 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 MGAT1P26572 445 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 HADHAP40939 763 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 NDST2P52849 883 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 MGAT3Q09327 533 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 MPP3Q13368 585 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 SPANXN3Q5MJ09 141 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 RTP2Q5QGT7 225 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 HDAC7Q8WUI4 952 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 CASD1Q96PB1 797 aa8.43□□□□□ -1.06
PTPRD-204ENST00000397606 TM6SF2Q9BZW4 377 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms