RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PLA2G4CQ9UP65 541 aa10.66□□□□□ -0.7
CPSF1P1-201ENST00000397477 FAM159BA6NKW6 160 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 TK2O00142 265 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 C2P06681 752 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 AKR1A1P14550 325 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 PRKCHP24723 683 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 CCDC15Q0P6D6 951 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 TRIM32Q13049 653 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 CNGA3Q16281 694 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 ANKRD20A4Q4UJ75 823 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 ACSBG2Q5FVE4 666 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 RALGPS1Q5JS13 557 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 RABGAP1LQ5R372 815 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 C4orf22Q6V702 233 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 C4orf50Q6ZRC1 276 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 GSTCDQ8NEC7 633 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 UPF1Q92900 1129 aaKnown RBP eCLIP10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 DHRS4Q9BTZ2 278 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 SAR1AQ9NR31 198 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 TMEM30AQ9NV96 361 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 MORF4L1Q9UBU8 362 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 TAGLN3Q9UI15 199 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 TRPV2Q9Y5S1 764 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 HACD1B0YJ81 288 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 PLIN3O60664 434 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 SERPINE1P05121 402 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 ZCCHC18P0CG32 403 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 CPB1P15086 417 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 PAX7P23759 505 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 EPHA3P29320 983 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 CRHR1P34998 444 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 SKIV2L2P42285 1042 aaKnown RBP10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 MPP1Q00013 466 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 RIPK1Q13546 671 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 PDPK2PQ6A1A2 396 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 LAYNQ6UX15 382 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 PAQR9Q6ZVX9 377 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 DEFB107AQ8IZN7 70 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 SNX31Q8N9S9 440 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 USP13Q92995 863 aaPredicted RBP10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 PHF21BQ96EK2 531 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 ZNF570Q96NI8 536 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 NPY6RQ99463 290 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 ARHGAP39Q9C0H5 1083 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 KATNBL1Q9H079 304 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 DCLRE1BQ9H816 532 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 KCNK4Q9NYG8 393 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC27A5Q9Y2P5 690 aa10.65□□□□□ -0.7
CPSF1P1-201ENST00000397477 NUP205Q92621 2012 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 EME2A4GXA9 379 aaPredicted RBP10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 NT5C1B-RDH14C9J2C7 533 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 TBX18O95935 607 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 CSHL1Q14406 222 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 MFSD14CQ5VZR4 134 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF470Q6ECI4 717 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF280DQ6N043 979 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 TAF2Q6P1X5 1199 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 URGCPQ8TCY9 931 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 DQX1Q8TE96 717 aaKnown RBP10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 VPS39Q96JC1 886 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 FTHL17Q9BXU8 183 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 KCNK13Q9HB14 408 aa10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 TRMT13Q9NUP7 481 aaKnown RBP10.65□□□□□ -0.71
CPSF1P1-201ENST00000397477 TADA2AO75478 443 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 ITGB1P05556 798 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 GSTA2P09210 222 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 TPBGLP0DKB5 382 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 TSHRP16473 764 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 GRK4P32298 578 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 GRM3Q14832 879 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 TAF12Q16514 161 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 MGAT5BQ3V5L5 792 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 SPDYAQ5MJ70 313 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 NAPEPLDQ6IQ20 393 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 CHSY1Q86X52 802 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 TDRD5Q8NAT2 981 aaKnown RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 ACVR1CQ8NER5 493 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 SCG3Q8WXD2 468 aaKnown RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 TMA16Q96EY4 203 aaKnown RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 FCRL2Q96LA5 508 aaPredicted RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 DDX50Q9BQ39 737 aaKnown RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 MTG1Q9BT17 334 aaPredicted RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 SP110Q9HB58 689 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 NMRAL1Q9HBL8 299 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 SSU72Q9NP77 194 aaKnown RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 DMAP1Q9NPF5 467 aaPredicted RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 NMRK2Q9NPI5 230 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 DLGAP2Q9P1A6 1054 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 TRIP11Q15643 1979 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 GPR182O15218 404 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 FBXO21O94952 628 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 CHRNGP07510 517 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 PBX3P40426 434 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 SERPINB8P50452 374 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 NUDT2P50583 147 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 COPAP53621 1224 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 NME5P56597 212 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 YWHAHQ04917 246 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms