RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TARSL2A2RTX5 802 aaKnown RBP21.7■■□□□ 1.06
CPNE1-204ENST00000397443 NEDD8-MDP1E9PL57 170 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 GFRA2O00451 464 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 CYBBP04839 570 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 STIP1P31948 543 aaKnown RBP21.7■■□□□ 1.06
CPNE1-204ENST00000397443 PPIDQ08752 370 aaKnown RBP21.7■■□□□ 1.06
CPNE1-204ENST00000397443 GPS1Q13098 491 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 MPPE1Q53F39 396 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 FSCBQ5H9T9 825 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 CHST9Q7L1S5 443 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 MFN1Q8IWA4 741 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 DEFB123Q8N688 67 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 BPIFB1Q8TDL5 484 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 HDAC11Q96DB2 347 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 SPON2Q9BUD6 331 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 TBC1D14Q9P2M4 693 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 CLEC4EQ9ULY5 219 aa21.7■■□□□ 1.06
CPNE1-204ENST00000397443 MYO18AQ92614 2054 aaKnown RBP21.69■■□□□ 1.06
CPNE1-204ENST00000397443 ARHGAP42A6NI28 874 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 FOSL2P15408 326 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 HOXD9P28356 352 aaPredicted RBP21.69■■□□□ 1.06
CPNE1-204ENST00000397443 RPL21P46778 160 aaKnown RBP21.69■■□□□ 1.06
CPNE1-204ENST00000397443 LY6G5CQ5SRR4 150 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 C6orf118Q5T5N4 469 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 DUPD1Q68J44 220 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 IFT20Q8IY31 132 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 CCDC13Q8IYE1 715 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 USP33Q8TEY7 942 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 ASIC4Q96FT7 647 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 KXD1Q9BQD3 176 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 MUC3BQ9H195 1237 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 ZFP14Q9HCL3 533 aa21.69■■□□□ 1.06
CPNE1-204ENST00000397443 IPO11Q9UI26 975 aaKnown RBP21.69■■□□□ 1.06
CPNE1-204ENST00000397443 CFAP69A5D8W1 941 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 RNF103O00237 685 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 MAFKO60675 156 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 LUC7L3O95232 432 aaKnown RBP21.68■■□□□ 1.06
CPNE1-204ENST00000397443 FCARP24071 287 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 CARSP49589 748 aaKnown RBP21.68■■□□□ 1.06
CPNE1-204ENST00000397443 GNA12Q03113 381 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 RNF219Q5W0B1 726 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-204ENST00000397443 IL31Q6EBC2 164 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 CXorf57Q6NSI4 855 aaKnown RBP21.68■■□□□ 1.06
CPNE1-204ENST00000397443 SYDE1Q6ZW31 735 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-204ENST00000397443 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.68■■□□□ 1.06
CPNE1-204ENST00000397443 BBS2Q9BXC9 721 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 PCDH9Q9HC56 1237 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 J3KR12 359 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 LAMP2P13473 410 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 TCF3P15923 654 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 WEE1P30291 646 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 RPL22P35268 128 aaKnown RBP21.68■■□□□ 1.06
CPNE1-204ENST00000397443 ACTN2P35609 894 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 IFNAR2P48551 515 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 GRM2Q14416 872 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 HLTFQ14527 1009 aaKnown RBP eCLIP21.68■■□□□ 1.065e-8■■□□□ 14.2
CPNE1-204ENST00000397443 P3H1Q32P28 736 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 PARP15Q460N3 678 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 SYCP2LQ5T4T6 812 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 ADGRG2Q8IZP9 1017 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 IRF7Q92985 503 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 FERMT1Q9BQL6 677 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 SP110Q9HB58 689 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 SPHK2Q9NRA0 654 aa21.68■■□□□ 1.06
CPNE1-204ENST00000397443 SLC9A3R1O14745 358 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-204ENST00000397443 CLCN6P51797 869 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 FAXCQ5TGI0 409 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 FYB2Q5VWT5 728 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 PARM1Q6UWI2 310 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 ARHGEF2Q92974 986 aaKnown RBP21.67■■□□□ 1.06
CPNE1-204ENST00000397443 GUCD1Q96NT3 240 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 UBE2ZQ9H832 354 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-204ENST00000397443 GDF3Q9NR23 364 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 TTLL3Q9Y4R7 772 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 MYBL2P10244 700 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 GLDCP23378 1020 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 MZF1P28698 734 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-204ENST00000397443 WASHC5Q12768 1159 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 ZBTB17Q13105 803 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 VITQ6UXI7 678 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 SETD3Q86TU7 594 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-204ENST00000397443 CCDC117Q8IWD4 279 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-204ENST00000397443 NAT16Q8N8M0 369 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 OSCP1Q8WVF1 389 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 FGF14Q92915 247 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 PLA2G2FQ9BZM2 168 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 BRD8Q9H0E9 1235 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 EBF3Q9H4W6 596 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 NFU1Q9UMS0 254 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 TBC1D30Q9Y2I9 924 aa21.67■■□□□ 1.06
CPNE1-204ENST00000397443 GRXCR2A6NFK2 248 aa21.66■■□□□ 1.06
CPNE1-204ENST00000397443 STK10O94804 968 aaKnown RBP21.66■■□□□ 1.06
CPNE1-204ENST00000397443 JCHAINP01591 159 aa21.66■■□□□ 1.06
CPNE1-204ENST00000397443 ARSAP15289 507 aa21.66■■□□□ 1.06
CPNE1-204ENST00000397443 CSKP41240 450 aa21.66■■□□□ 1.06
CPNE1-204ENST00000397443 YBEYP58557 167 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-204ENST00000397443 SERINC3Q13530 473 aa21.66■■□□□ 1.06
CPNE1-204ENST00000397443 RHBDF2Q6PJF5 856 aa21.66■■□□□ 1.06
CPNE1-204ENST00000397443 AGAP3Q96P47 875 aa21.66■■□□□ 1.06
CPNE1-204ENST00000397443 MAGEH1Q9H213 219 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms