RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 CXCL14O95715 111 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 HIST1H2AGP0C0S8 130 aaPredicted RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 CPA3P15088 417 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 HIST1H2ADP20671 130 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 SERPINB3P29508 390 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 CDH13P55290 713 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 MTFR1Q15390 333 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 PPM1JQ5JR12 505 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 ZNF467Q7Z7K2 595 aaPredicted RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 OSTM1Q86WC4 334 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 ZCCHC9Q8N567 271 aaKnown RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 ZNF366Q8N895 744 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 HIST1H2AHQ96KK5 128 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 SPATA13Q96N96 652 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 HIST1H2AJQ99878 128 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 H2AFJQ9BTM1 129 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 CD248Q9HCU0 757 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 UXTQ9UBK9 157 aaPredicted RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 PCYOX1Q9UHG3 505 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 GIT1Q9Y2X7 761 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 CCDC85CA6NKD9 419 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 BTNL10A8MVZ5 291 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 TPP1O14773 563 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 PRPF4O43172 522 aaKnown RBP eCLIP11.38□□□□□ -0.59
IFT140-202ENST00000397417 TLL1O43897 1013 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 NOVP48745 357 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 ELAVL2Q12926 359 aaKnown RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 GRIK3Q13003 919 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 GRB14Q14449 540 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 CBX2Q14781 532 aaPredicted RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 GALNT4Q8N4A0 578 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 GBP7Q8N8V2 638 aaPredicted RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 LMO3Q8TAP4 145 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 USP13Q92995 863 aaPredicted RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 DDX50Q9BQ39 737 aaKnown RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 TTPALQ9BTX7 342 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 FAM129AQ9BZQ8 928 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 TRIM33Q9UPN9 1127 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 C10orf71Q711Q0 1435 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 LTBP3Q9NS15 1303 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 RNF103-CHMP3A0A140T963 221 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 CCL16O15467 120 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 TBL1XO60907 577 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 BEST1O76090 585 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 SERPINB9P50453 376 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 NUDT2P50583 147 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 NOMO1Q15155 1222 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 HECTD3Q5T447 861 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 TRMT10BQ6PF06 316 aaKnown RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 DCLRE1AQ6PJP8 1040 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 SLC44A2Q8IWA5 706 aaPredicted RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 FUKQ8N0W3 1084 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 UNC93B1Q9H1C4 597 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 EPS15L1Q9UBC2 864 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 TRMT6Q9UJA5 497 aaKnown RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 PCDHGC4Q9Y5F7 938 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 ARAP2Q8WZ64 1704 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 XPO1O14980 1071 aaKnown RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 LYPLA1O75608 230 aaPredicted RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 PCDH8O95206 1070 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 CYP1A1P04798 512 aaPredicted RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 SELPP16109 830 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 RPS24P62847 133 aaKnown RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 PPM1LQ5SGD2 360 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 FUT10Q6P4F1 479 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 SLC41A1Q8IVJ1 513 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 PAWRQ96IZ0 340 aaKnown RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 HBEGFQ99075 208 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 ZDHHC6Q9H6R6 413 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 SRRDQ9UH36 339 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 GTF2IRD1Q9UHL9 959 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 SLC4A7Q9Y6M7 1214 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 FAM237BA0A1B0GVD1 139 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 UGT1A9O60656 530 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 E2F6O75461 281 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 GLP2RO95838 553 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 MSX2P35548 267 aaPredicted RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 POU4F1Q01851 419 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 SLC25A52Q3SY17 297 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 FSCBQ5H9T9 825 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 MRNIPQ6NTE8 343 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 NAPRTQ6XQN6 538 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 GLT6D1Q7Z4J2 308 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 ARHGAP18Q8N392 663 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 ARL14EPQ8N8R7 260 aaPredicted RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 EIF1ADQ8N9N8 165 aaKnown RBP11.37□□□□□ -0.59
IFT140-202ENST00000397417 SNX31Q8N9S9 440 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 CPT1BQ92523 772 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 FBXL18Q96ME1 805 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 TMEM120AQ9BXJ8 343 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 BRD8Q9H0E9 1235 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 UGT1A7Q9HAW7 530 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 UGT1A10Q9HAW8 530 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 UGT1A8Q9HAW9 530 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 MIOSQ9NXC5 875 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 HCSTQ9UBK5 93 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 ADAM28Q9UKQ2 775 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 PLA2G4CQ9UP65 541 aa11.37□□□□□ -0.59
IFT140-202ENST00000397417 A0A1B0GUL6 1792 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms