RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 RHBDF2Q6PJF5 856 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 ZNF354CQ86Y25 554 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 CCDC13Q8IYE1 715 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 ALLCQ8N6M5 410 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 MAFAQ8NHW3 353 aaPredicted RBP24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 NSMCE1Q8WV22 266 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 FGF14Q92915 247 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 KXD1Q9BQD3 176 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 MUC3BQ9H195 1237 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 AMACRQ9UHK6 382 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 HPCAL4Q9UM19 191 aa24.13■■□□□ 1.45
TSPAN4-202ENST00000397396 SGK1O00141 431 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 MAP3K6O95382 1288 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 TYRP14679 529 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 ACTN2P35609 894 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 PAPOLAP51003 745 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 AP1B1Q10567 949 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 TEX35Q5T0J7 233 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 PTCRAQ6ISU1 281 aaPredicted RBP24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 CCDC89Q8N998 374 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 NOA1Q8NC60 698 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 HTR3CQ8WXA8 447 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 UBXN4Q92575 508 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 VAT1Q99536 393 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 TMEM121Q9BTD3 319 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 NOL6Q9H6R4 1146 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 SP110Q9HB58 689 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 HAUS2Q9NVX0 235 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 NUMBLQ9Y6R0 609 aa24.12■■□□□ 1.45
TSPAN4-202ENST00000397396 C2CD4DB7Z1M9 353 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 CACNG3O60359 315 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 KCNJ1P48048 391 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 SERINC3Q13530 473 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 PPP1R7Q15435 360 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 C4orf22Q6V702 233 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 ARHGEF2Q92974 986 aaKnown RBP24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 BHMTQ93088 406 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 RTP4Q96DX8 246 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 ASIC4Q96FT7 647 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 HMCESQ96FZ2 354 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 LGMNQ99538 433 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 RAB17Q9H0T7 212 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 ECT2Q9H8V3 914 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 IGSF9Q9P2J2 1179 aa24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 IPO11Q9UI26 975 aaKnown RBP24.11■■□□□ 1.45
TSPAN4-202ENST00000397396 CXorf51AA0A1B0GTR3 108 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 ZSCAN5CA6NGD5 496 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 KCNN4O15554 427 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 IL10RBQ08334 325 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 GRM2Q14416 872 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 DMC1Q14565 340 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 PREPLQ4J6C6 727 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 RNF219Q5W0B1 726 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 IL31Q6EBC2 164 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 JAMLQ86YT9 394 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 DCAF4L2Q8NA75 395 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 RUBCNQ92622 972 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 ZNF599Q96NL3 588 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 C2orf49Q9BVC5 232 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 EBF3Q9H4W6 596 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 PCDH9Q9HC56 1237 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 ATP13A1Q9HD20 1204 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 PLK2Q9NYY3 685 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 UTP11Q9Y3A2 253 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 NDC80O14777 642 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 RAD51CO43502 376 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 MAFKO60675 156 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 RBL1P28749 1068 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 GDI1P31150 447 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 GEMIN4P57678 1058 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 RUNX3Q13761 415 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 AAK1Q2M2I8 961 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 P3H1Q32P28 736 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 TMCO4Q5TGY1 634 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 TRIM68Q6AZZ1 485 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 P2RY11Q96G91 374 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 ACE2Q9BYF1 805 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 PLA2G2FQ9BZM2 168 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 BRD9Q9H8M2 597 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 VPS28Q9UK41 221 aa24.1■■□□□ 1.45
TSPAN4-202ENST00000397396 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 MATN3O15232 486 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 TTI1O43156 1089 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 KDELR3O43731 214 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 IFNB1P01574 187 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 ARSAP15289 507 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 SP100P23497 879 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 PTGIRP43119 386 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 PLK1P53350 603 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 PTK6Q13882 451 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 BBS5Q8N3I7 341 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 LRRN4CLQ8ND94 238 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 WFIKKN2Q8TEU8 576 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 ACDQ96AP0 544 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 ZFYVE19Q96K21 471 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 LRRC1Q9BTT6 524 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 USP29Q9HBJ7 922 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 HPS4Q9NQG7 708 aa24.09■■□□□ 1.45
TSPAN4-202ENST00000397396 TRHDEQ9UKU6 1024 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms