RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 HSP90AA5PQ58FG0 334 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 IYDQ6PHW0 289 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 SLC26A9Q7LBE3 791 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 PTAR1Q7Z6K3 402 aaPredicted RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 ICA1LQ8NDH6 482 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 TRPM4Q8TD43 1214 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 PPP4R1Q8TF05 950 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 PPP1R13LQ8WUF5 828 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 UPF1Q92900 1129 aaKnown RBP eCLIP14.22□□□□□ -0.13
NUP98-204ENST00000397004 CNBD2Q96M20 576 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 APOL2Q9BQE5 337 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 UNKQ9C0B0 810 aaKnown RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 DDX18Q9NVP1 670 aaKnown RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 AP4B1Q9Y6B7 739 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 A0A096LPK6 155 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 CCDC78A2IDD5 438 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 SPTLC1O15269 473 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 INSRRP14616 1297 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 GABRB3P28472 473 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 ADORA2BP29275 332 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 CD68P34810 354 aaPredicted RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 LIMK2P53671 638 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 GLRA4Q5JXX5 417 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 RIOX2Q8IUF8 465 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 MFSD6LQ8IWD5 586 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 TMEM102Q8N9M5 508 aaPredicted RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 FAM167AQ96KS9 214 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 NUF2Q9BZD4 464 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 TNFRSF12AQ9NP84 129 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 TCF7L2Q9NQB0 619 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 ATP9BO43861 1147 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 TSPAN1O60635 241 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 RNASEH2AO75792 299 aaKnown RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 SLC5A2P31639 672 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 USP46P62068 366 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 ARL13AQ5H913 290 aaPredicted RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 TMEM135Q86UB9 458 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 SPATA6LQ8N4H0 392 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 KIF12Q96FN5 646 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 SPATC1LQ9H0A9 340 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 CHRAC1Q9NRG0 131 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 RNF11Q9Y3C5 154 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 PRSS51A0A1B0GVH4 220 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 P4HA1P13674 534 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 NDUFV1P49821 464 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 ADGRE1Q14246 886 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 ZNF460Q14592 562 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 FAM187BQ17R55 369 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 TSTD2Q5T7W7 516 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 SYPL2Q5VXT5 272 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 NPWQ8N729 165 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 DGCR14Q96DF8 476 aaKnown RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 MLPHQ9BV36 600 aaPredicted RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 SLC2A11Q9BYW1 496 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 OXSMQ9NWU1 459 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 GNEQ9Y223 722 aaKnown RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 IRF6O14896 467 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 GAS2O43903 313 aaKnown RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 RPL10P27635 214 aaKnown RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 RBP5P82980 135 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 APOFQ13790 326 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 CTU1Q7Z7A3 348 aaKnown RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 NLGN2Q8NFZ4 835 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 FAM81AQ8TBF8 368 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 ZNF419Q96HQ0 510 aaPredicted RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 NFKBIZQ9BYH8 718 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 GMPR2Q9P2T1 348 aaKnown RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 ZSWIM8A7E2V4 1837 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 TSC2P49815 1807 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 SYNJ2BP-COX16A0A087WUM0 186 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 TCAF2A6NFQ2 919 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 HNRNPRO43390 633 aaKnown RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 HSPA4LO95757 839 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 TPH1P17752 444 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 RPS12P25398 132 aaKnown RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 PRDX6P30041 224 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 RPL34P49207 117 aaKnown RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 C4orf22Q6V702 233 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 HFE2Q6ZVN8 426 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 BHLHE22Q8NFJ8 381 aaPredicted RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 RIN3Q8TB24 985 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 TMIGD2Q96BF3 282 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 ZNF669Q96BR6 464 aaPredicted RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 CNDP1Q96KN2 507 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 CATSPER2Q96P56 530 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 GCOM2Q9BZD3 368 aaPredicted RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 EIF2B3Q9NR50 452 aaKnown RBP14.21□□□□□ -0.13
NUP98-204ENST00000397004 COX16Q9P0S2 106 aa14.21□□□□□ -0.13
NUP98-204ENST00000397004 POLR2AP24928 1970 aaKnown RBP14.21□□□□□ -0.14
NUP98-204ENST00000397004 TARM1B6A8C7 271 aa14.21□□□□□ -0.14
NUP98-204ENST00000397004 NOP56O00567 594 aaKnown RBP14.21□□□□□ -0.14
NUP98-204ENST00000397004 NELFEP18615 380 aaKnown RBP14.21□□□□□ -0.14
NUP98-204ENST00000397004 HDCP19113 662 aa14.21□□□□□ -0.14
NUP98-204ENST00000397004 GALNT4Q8N4A0 578 aa14.21□□□□□ -0.14
NUP98-204ENST00000397004 URGCPQ8TCY9 931 aa14.21□□□□□ -0.14
NUP98-204ENST00000397004 NPAS2Q99743 824 aa14.21□□□□□ -0.14
NUP98-204ENST00000397004 CPNE1Q99829 537 aa14.21□□□□□ -0.14
NUP98-204ENST00000397004 PRMT7Q9NVM4 692 aaPredicted RBP14.21□□□□□ -0.14
NUP98-204ENST00000397004 H3BSA7 217 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 STAU1O95793 577 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms