RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 PPP2R5EQ16537 467 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 TAZQ16635 292 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 PARP15Q460N3 678 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 ANKRD20A8PQ5CZ79 823 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 RNF219Q5W0B1 726 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-202ENST00000396653 TMCO3Q6UWJ1 677 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 TRMT11Q7Z4G4 463 aaKnown RBP16.84■□□□□ 0.29
AP1S3-202ENST00000396653 RCOR2Q8IZ40 523 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 FBXL6Q8N531 539 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 UBL4BQ8N7F7 174 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 ACDQ96AP0 544 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 PBXIP1Q96AQ6 731 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 RNF157Q96PX1 679 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 KLC2Q9H0B6 622 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 MUC3BQ9H195 1237 aa16.84■□□□□ 0.29
AP1S3-202ENST00000396653 GPR37L1O60883 481 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 RNF40O75150 1001 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 SRPRAP08240 638 aaKnown RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 DLDP09622 509 aaKnown RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 PTPN7P35236 360 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 COPS2P61201 443 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 MMRN1Q13201 1228 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 POLD3Q15054 466 aaPredicted RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 AFMIDQ63HM1 303 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 MFSD7Q6UXD7 560 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 SFTPA1Q8IWL2 248 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 APCDD1Q8J025 514 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 ZNF513Q8N8E2 541 aaPredicted RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 KDM1BQ8NB78 822 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 PCDH19Q8TAB3 1148 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 USP33Q8TEY7 942 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 ARHGEF2Q92974 986 aaKnown RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 PSMB7Q99436 277 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 C2orf49Q9BVC5 232 aaPredicted RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 C1QTNF1Q9BXJ1 281 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 ACE2Q9BYF1 805 aaPredicted RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 CIPCQ9C0C6 399 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 NOL6Q9H6R4 1146 aaKnown RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 LRRC19Q9H756 370 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 C11orf16Q9NQ32 467 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 RBM12Q9NTZ6 932 aaKnown RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 TRMT1Q9NXH9 659 aaKnown RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 DLGAP2Q9P1A6 1054 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 THAP10Q9P2Z0 257 aaPredicted RBP16.83■□□□□ 0.28
AP1S3-202ENST00000396653 VPS28Q9UK41 221 aa16.83■□□□□ 0.28
AP1S3-202ENST00000396653 A0A0D9SEW6 157 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 PRR33A8MZF0 331 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 DDX3YO15523 660 aaKnown RBP16.82■□□□□ 0.28
AP1S3-202ENST00000396653 KIF5CO60282 957 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 ZFXP17010 805 aaPredicted RBP16.82■□□□□ 0.28
AP1S3-202ENST00000396653 MSNP26038 577 aaKnown RBP16.82■□□□□ 0.28
AP1S3-202ENST00000396653 CDKN2BP42772 138 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 ENPP2Q13822 863 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 PAFAH1B3Q15102 231 aaKnown RBP16.82■□□□□ 0.28
AP1S3-202ENST00000396653 TFDP3Q5H9I0 405 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 MEI1Q5TIA1 1274 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 EGFLAMQ63HQ2 1017 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 NCBP2-AS2Q69YL0 99 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 SLC9A4Q6AI14 798 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 SPOCD1Q6ZMY3 1216 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 NPWQ8N729 165 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 PQLC3Q8N755 202 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 OR7D4Q8NG98 312 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.82■□□□□ 0.28
AP1S3-202ENST00000396653 ALG3Q92685 438 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 RNF25Q96BH1 459 aaPredicted RBP16.82■□□□□ 0.28
AP1S3-202ENST00000396653 ATP13A1Q9HD20 1204 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 HCN2Q9UL51 889 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 EFR3BQ9Y2G0 817 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 MUC3AQ02505 3323 aa16.82■□□□□ 0.28
AP1S3-202ENST00000396653 hCG_1818297A0A087WSY0 165 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 ARHGAP42A6NI28 874 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 USP27XA6NNY8 438 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 RASA4BC9J798 803 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 RASA4O43374 803 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 ATG13O75143 517 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 CETN2P41208 172 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 ECT2LQ008S8 904 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 MAMSTRQ6ZN01 415 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 Q6ZS52 159 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 ARHGAP12Q8IWW6 846 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 RPLP0P6Q8NHW5 317 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 MAK16Q9BXY0 300 aaKnown RBP16.81■□□□□ 0.28
AP1S3-202ENST00000396653 ETNK2Q9NVF9 386 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 SLC25A13Q9UJS0 675 aa16.81■□□□□ 0.28
AP1S3-202ENST00000396653 PACSIN2Q9UNF0 486 aaPredicted RBP16.81■□□□□ 0.28
AP1S3-202ENST00000396653 SHROOM3Q8TF72 1996 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 ZSCAN5CA6NGD5 496 aaPredicted RBP16.8■□□□□ 0.28
AP1S3-202ENST00000396653 APOL1O14791 398 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 PI15O43692 258 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 ZMPSTE24O75844 475 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 DCNP07585 359 aaKnown RBP16.8■□□□□ 0.28
AP1S3-202ENST00000396653 TIE1P35590 1138 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 ACVRL1P37023 503 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 SEC13P55735 322 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 GEMIN4P57678 1058 aaKnown RBP16.8■□□□□ 0.28
AP1S3-202ENST00000396653 SLC20A2Q08357 652 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 SERINC3Q13530 473 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 TFDP2Q14188 446 aa16.8■□□□□ 0.28
AP1S3-202ENST00000396653 ZNF234Q14588 700 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms