RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 LSMEM2Q8N112 164 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 CLEC4CQ8WTT0 213 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 ERCC4Q92889 916 aaPredicted RBP18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 CRELD1Q96HD1 420 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 RPL10LQ96L21 214 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 FCRL3Q96P31 734 aaPredicted RBP18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 ZSWIM1Q9BR11 485 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 THAP9Q9H5L6 903 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 ST7Q9NRC1 585 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 ARHGAP20Q9P2F6 1191 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 PTPRQQ9UMZ3 2332 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 C1QTNF3-AMACRE9PGA6 284 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 RNF225M0QZC1 329 aaPredicted RBP18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 CBX4O00257 560 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 WNT9AO14904 365 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 MED7O43513 233 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 TLX3O43711 291 aaPredicted RBP18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 ATP9BO43861 1147 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 PROX2Q3B8N5 592 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 FOXR2Q6PJQ5 311 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 TAC4Q86UU9 113 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 SPATS2Q86XZ4 545 aaKnown RBP18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 CCAR2Q8N163 923 aaKnown RBP18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 FAM174AQ8TBP5 190 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 FRS2Q8WU20 508 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 MYEOVQ96EZ4 313 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 DHTKD1Q96HY7 919 aaPredicted RBP18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 SLC4A5Q9BY07 1137 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 GOLPH3LQ9H4A5 285 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 PREBQ9HCU5 417 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 EVA1BQ9NVM1 165 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 SLC25A13Q9UJS0 675 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 CNTN6Q9UQ52 1028 aa18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 FARP1Q9Y4F1 1045 aaPredicted RBP18.04■□□□□ 0.48
EXOSC3-202ENST00000396521 TMEM131Q92545 1883 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 RIOK3O14730 519 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 MCF2LO15068 1137 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 TRUB2O95900 331 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 IGLV3-25P01717 112 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 GLI1P08151 1106 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 UCNP55089 124 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 PNOCQ13519 176 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 TBC1D25Q3MII6 688 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 ZC3H12AQ5D1E8 599 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 SYPL2Q5VXT5 272 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 RAP1GAP2Q684P5 730 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 SMYD5Q6GMV2 418 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 TMEM110Q86TL2 294 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 SPATA20Q8TB22 786 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 KLHDC7BQ96G42 594 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 ASH1LQ9NR48 2969 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 KLHL11Q9NVR0 708 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 PPM1HQ9ULR3 514 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 BPTFQ12830 3046 aa18.03■□□□□ 0.48
EXOSC3-202ENST00000396521 BRINP1O60477 761 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 CCR1P32246 355 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 STK19P49842 368 aaPredicted RBP18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 PPP2CBP62714 309 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 PPP2CAP67775 309 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 CDK17Q00537 523 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 EIF4EBP2Q13542 120 aaPredicted RBP18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 EHBP1Q8NDI1 1231 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 ZNF248Q8NDW4 579 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 LMO3Q8TAP4 145 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 SMARCE1Q969G3 411 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 IFT43Q96FT9 208 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 WBP1Q96G27 269 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 FAM81BQ96LP2 452 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 CCDC114Q96M63 670 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 PRMT1Q99873 361 aaKnown RBP18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 USP29Q9HBJ7 922 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 TMEM51Q9NW97 253 aa18.02■□□□□ 0.48
EXOSC3-202ENST00000396521 RTN2O75298 545 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 GNA14O95837 355 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 ALPPL2P10696 532 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 PDGFRAP16234 1089 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 ZNF18P17022 549 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 PMS1P54277 932 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 INSM1Q01101 510 aaPredicted RBP18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 TLE3Q04726 772 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 ACCSLQ4AC99 568 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 CCDC40Q4G0X9 1142 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 AGBL4Q5VU57 503 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 ENOSF1Q7L5Y1 443 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 ZNF605Q86T29 641 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 OR4C6Q8NH72 309 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 RNF34Q969K3 372 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 ZNF578Q96N58 590 aaPredicted RBP18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 FEM1AQ9BSK4 669 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 XPO7Q9UIA9 1087 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 ZDHHC9Q9Y397 364 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 RAI2Q9Y5P3 530 aa18.01■□□□□ 0.47
EXOSC3-202ENST00000396521 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18■□□□□ 0.47
EXOSC3-202ENST00000396521 GOLGA6L4A6NEF3 574 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 NEMP2A6NFY4 417 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 SIGLEC6O43699 453 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 CLDN11O75508 207 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 MT-CO3P00414 261 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 GP1BAP07359 652 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 MAT2AP31153 395 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms