RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SIRT4Q9Y6E7 314 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P10-201ENST00000395823 EPN1Q9Y6I3 576 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P10-201ENST00000395823 TCRBV5S1A1TA0A578 114 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 MCIDASD6RGH6 385 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 IFNL4K9M1U5 179 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 TCERG1O14776 1098 aaKnown RBP5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 EXOC3O60645 756 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 ESRRBO95718 433 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 CHRM4P08173 479 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 SLC3A2P08195 630 aaKnown RBP5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 PORP16435 677 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 HOXB9P17482 250 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 IDUAP35475 653 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 BSGP35613 385 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 ADPRHP54922 357 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 ZBTB16Q05516 673 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 SLC14A1Q13336 389 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 MAMLD1Q13495 774 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 ACVR2BQ13705 512 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 LARS2Q15031 903 aaKnown RBP5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 ERCC6LQ2NKX8 1250 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 SLC30A9Q6PML9 568 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 TTC39CQ8N584 583 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 NCSTNQ92542 709 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 PDLIM2Q96JY6 352 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 FYTTD1Q96QD9 318 aaKnown RBP5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 ZNF347Q96SE7 839 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 ABHD14AQ9BUJ0 271 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 EIF2B3Q9NR50 452 aaKnown RBP5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 SLC25A13Q9UJS0 675 aa5.42□□□□□ -1.54
HMGB1P10-201ENST00000395823 GRID2IPA4D2P6 1211 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 TTC34A8MYJ7 566 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 TMEM232C9JQI7 657 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 GTPBP1O00178 669 aaKnown RBP5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 AP3D1O14617 1153 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 HKR1P10072 659 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 COX7A2P14406 83 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 AKR1B1P15121 316 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 ARL3P36405 182 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 PBX3P40426 434 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 EFNB1P98172 346 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 CREB5Q02930 508 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 KCNB1Q14721 858 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 ARL13AQ5H913 290 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 TTLL5Q6EMB2 1281 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 TMEM81Q6P7N7 255 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 ZNF474Q6S9Z5 364 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 TFAP2DQ7Z6R9 452 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 VRK3Q8IV63 474 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 LCORLQ8N3X6 602 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 CELF1Q92879 486 aaKnown RBP5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 KLHL29Q96CT2 875 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 HIC2Q96JB3 615 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 KLHL15Q96M94 604 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 COQ10AQ96MF6 247 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 HS6ST2Q96MM7 605 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 HEMGNQ9BXL5 484 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 FRMD8Q9BZ67 464 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 SLC32A1Q9H598 525 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 Q9N2J8 555 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 ARL15Q9NXU5 204 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 NKIRAS2Q9NYR9 191 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 MPP6Q9NZW5 540 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 PEMTQ9UBM1 199 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 SLCO3A1Q9UIG8 710 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 DTX4Q9Y2E6 619 aa5.41□□□□□ -1.54
HMGB1P10-201ENST00000395823 TEX13CA0A0J9YWL9 993 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 CCDC151A5D8V7 595 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 MGST3O14880 152 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 PLOD3O60568 738 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 PGM3O95394 542 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 TGM2P21980 687 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 RARSP54136 660 aaKnown RBP5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 NLRP5P59047 1200 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 MC1RQ01726 317 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 FOXE3Q13461 319 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 DUSP28Q4G0W2 176 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 MIIPQ5JXC2 388 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 IKBIPQ70UQ0 350 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 SZRD1Q7Z422 152 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 NEK8Q86SG6 692 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 WDTC1Q8N5D0 677 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 IP6K1Q92551 441 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 TBC1D5Q92609 795 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 GLIS2Q9BZE0 524 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 SCPEP1Q9HB40 452 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 LRIT1Q9P2V4 623 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 FBXO4Q9UKT5 387 aa5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 REXO2Q9Y3B8 237 aaKnown RBP5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 HEMK1Q9Y5R4 338 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P10-201ENST00000395823 hCG_1807616A0A1W2PRN6 198 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 PABPN1LA6NDY0 278 aaKnown RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 LIPT2A6NK58 231 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 RRHO14718 337 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 CEP104O60308 925 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 CCNT1O60563 726 aaKnown RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 TACC1O75410 805 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 SPARCP09486 303 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 GSTM2P28161 218 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms