RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 TBC1D3HP0C7X1 549 aa19.83■□□□□ 0.77
COL11A2-204ENST00000395194 PNMA6AP0CW24 399 aaPredicted RBP19.83■□□□□ 0.77
COL11A2-204ENST00000395194 MAT2AP31153 395 aaKnown RBP19.83■□□□□ 0.77
COL11A2-204ENST00000395194 CCR1P32246 355 aa19.83■□□□□ 0.77
COL11A2-204ENST00000395194 DRD3P35462 400 aa19.83■□□□□ 0.77
COL11A2-204ENST00000395194 ELAVL3Q14576 367 aaKnown RBP19.83■□□□□ 0.77
COL11A2-204ENST00000395194 INAVAQ3KP66 663 aa19.83■□□□□ 0.77
COL11A2-204ENST00000395194 TBC1D3GQ6DHY5 549 aa19.83■□□□□ 0.77
COL11A2-204ENST00000395194 TBC1D3CQ6IPX1 549 aa19.83■□□□□ 0.77
COL11A2-204ENST00000395194 GBP6Q6ZN66 633 aa19.83■□□□□ 0.77
COL11A2-204ENST00000395194 TBC1D3Q8IZP1 549 aaPredicted RBP19.83■□□□□ 0.77
COL11A2-204ENST00000395194 PLCB1Q9NQ66 1216 aa19.83■□□□□ 0.77
COL11A2-204ENST00000395194 SARDHQ9UL12 918 aa19.83■□□□□ 0.77
COL11A2-204ENST00000395194 A0A1W2PR77 199 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 TRABD2BA6NFA1 517 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 HSF2BPO75031 334 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 ERBB2P04626 1255 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 ITGAVP06756 1048 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 CCR5P51681 352 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 CYP4F3Q08477 520 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 DNAJC3Q13217 504 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 AUHQ13825 339 aaKnown RBP19.82■□□□□ 0.76
COL11A2-204ENST00000395194 SHBQ15464 509 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 EXOC3L4Q17RC7 722 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 TTC39BQ5VTQ0 682 aaPredicted RBP19.82■□□□□ 0.76
COL11A2-204ENST00000395194 GALNT15Q8N3T1 639 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 FRS2Q8WU20 508 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 HNRNPLLQ8WVV9 542 aaKnown RBP19.82■□□□□ 0.76
COL11A2-204ENST00000395194 SHC3Q92529 594 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 SKA1Q96BD8 255 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 SPAG5Q96R06 1193 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 SIK2Q9H0K1 926 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 GDF3Q9NR23 364 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 RWDD2AQ9UIY3 292 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 SLC25A13Q9UJS0 675 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 ASXL3Q9C0F0 2248 aa19.82■□□□□ 0.76
COL11A2-204ENST00000395194 SLC2A3P11169 496 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 PON1P27169 355 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 MTIF2P46199 727 aaKnown RBP19.81■□□□□ 0.76
COL11A2-204ENST00000395194 SULT2A1Q06520 285 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 SLC12A1Q13621 1099 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 EFHC1Q5JVL4 640 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 C11orf57Q6ZUT1 292 aaPredicted RBP19.81■□□□□ 0.76
COL11A2-204ENST00000395194 Q6ZVU0 165 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 C14orf80Q86SX3 495 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 EID2Q8N6I1 236 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 OR8D1Q8WZ84 308 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 SYNCQ9H7C4 482 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 ASNSD1Q9NWL6 643 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 VPS28Q9UK41 221 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 HS3ST4Q9Y661 456 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 IGSF10Q6WRI0 2623 aa19.81■□□□□ 0.76
COL11A2-204ENST00000395194 C10orf142B7Z368 130 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 M0QYT0 321 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 ENC1O14682 589 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 DFNA5O60443 496 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 PAGE1O75459 146 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 DAB1O75553 588 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 GLI1P08151 1106 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 CNTN1Q12860 1018 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 BNIP3Q12983 259 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 DLG2Q15700 870 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 PTPN20Q4JDL3 420 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 OLFML1Q6UWY5 402 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 SLC47A2Q86VL8 602 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 IRF2BP1Q8IU81 584 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 SAP25Q8TEE9 199 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 ALG14Q96F25 216 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 CNDP2Q96KP4 475 aaKnown RBP19.8■□□□□ 0.76
COL11A2-204ENST00000395194 FAM81BQ96LP2 452 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 NOX5Q96PH1 765 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 FEM1AQ9BSK4 669 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 SIX2Q9NPC8 291 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 KIAA1468Q9P260 1216 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 PCDHGC3Q9UN70 934 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 CA5BQ9Y2D0 317 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 SNX10Q9Y5X0 201 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 SMG1Q96Q15 3661 aaKnown RBP19.8■□□□□ 0.76
COL11A2-204ENST00000395194 DOCK4Q8N1I0 1966 aa19.8■□□□□ 0.76
COL11A2-204ENST00000395194 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.79■□□□□ 0.76
COL11A2-204ENST00000395194 TLR4O00206 839 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 CNTN5O94779 1100 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 LDOC1O95751 146 aaPredicted RBP19.79■□□□□ 0.76
COL11A2-204ENST00000395194 ZNF18P17022 549 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 TFE3P19532 575 aaPredicted RBP19.79■□□□□ 0.76
COL11A2-204ENST00000395194 EPHA8P29322 1005 aaPredicted RBP19.79■□□□□ 0.76
COL11A2-204ENST00000395194 PLK1P53350 603 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 NXPH1P58417 271 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 RNASE9P60153 205 aaKnown RBP19.79■□□□□ 0.76
COL11A2-204ENST00000395194 PTK2Q05397 1052 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 ZNF177Q13360 481 aaPredicted RBP19.79■□□□□ 0.76
COL11A2-204ENST00000395194 CAMK2BQ13554 666 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 SMAD1Q15797 465 aaKnown RBP19.79■□□□□ 0.76
COL11A2-204ENST00000395194 OTUD1Q5VV17 481 aaPredicted RBP19.79■□□□□ 0.76
COL11A2-204ENST00000395194 NAPEPLDQ6IQ20 393 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 PRPF39Q86UA1 669 aaKnown RBP19.79■□□□□ 0.76
COL11A2-204ENST00000395194 PIP4K2CQ8TBX8 421 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 MYOCQ99972 504 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 MUC3BQ9H195 1237 aa19.79■□□□□ 0.76
COL11A2-204ENST00000395194 DNAJC12Q9UKB3 198 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms