RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 L3MBTL1Q9Y468 752 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 FKTNO75072 461 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 HARS2P49590 506 aaKnown RBP16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 PARP6Q2NL67 630 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 ATG16L1Q676U5 607 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 NAPEPLDQ6IQ20 393 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 CDHR3Q6ZTQ4 885 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 PSTKQ8IV42 348 aaKnown RBP16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 FITM2Q8N6M3 262 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 PHF21BQ96EK2 531 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 MYLK2Q9H1R3 596 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 USH1CQ9Y6N9 552 aa16.23■□□□□ 0.19
SMARCD1-202ENST00000394963 BCLAF3A2AJT9 711 aaKnown RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 B4GALT3O60512 393 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 ADAMTS4O75173 837 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 CRCPO75575 148 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 WDR75Q8IWA0 830 aaKnown RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 SLC39A8Q9C0K1 460 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 MTMR10Q9NXD2 777 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 A8MUI8 341 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 RAMP2O60895 175 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 SKAP2O75563 359 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 MBL2P11226 248 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 SELPP16109 830 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 LRPAP1P30533 357 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 PAPOLAP51003 745 aaKnown RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 GTF2A1P52655 376 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 BST1Q10588 318 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 GALNT3Q14435 633 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 POLD3Q15054 466 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 FUT10Q6P4F1 479 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 TMC7Q7Z402 723 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 EFCAB3Q8N7B9 438 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 STMN2Q93045 179 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 TMEM120AQ9BXJ8 343 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 DNAJC16Q9Y2G8 782 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 FARP1Q9Y4F1 1045 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 ACTL7AQ9Y615 435 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 NCF1BA6NI72 391 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 NCF1CA8MVU1 366 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 TOMM70O94826 608 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 NCF1P14598 390 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 VEGFBP49765 207 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 CSHL1Q14406 222 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 PTPRCAPQ14761 206 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 DENND6AQ8IWF6 608 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 PSMG2Q969U7 264 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 CERS2Q96G23 380 aa16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 QKIQ96PU8 341 aaKnown RBP eCLIP16.22■□□□□ 0.19
SMARCD1-202ENST00000394963 A0A096LPK6 155 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 UNCXA6NJT0 531 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 RAG1P15918 1043 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 NMBRP28336 390 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 HNRNPH1P31943 449 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 SPRP35270 261 aaPredicted RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 PKDCCQ504Y2 493 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 CLLU1OSQ5K130 101 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 ZNF697Q5TEC3 545 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 SLC9A4Q6AI14 798 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 TAS2R42Q7RTR8 314 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 PPHLN1Q8NEY8 458 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 UTP6Q9NYH9 597 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 Q9Y3F1 56 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 A0A0U1RQS6 177 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 H0Y626 953 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 J3KR12 359 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 RPS24P62847 133 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 ADAM17P78536 824 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 MGAT5Q09328 741 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 TSTA3Q13630 321 aaPredicted RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 KCNJ11Q14654 390 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 TEX44Q53QW1 395 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 SLC44A1Q8WWI5 657 aa16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 ZNF317Q96PQ6 595 aaPredicted RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 ACTR5Q9H9F9 607 aaPredicted RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 TLR8Q9NR97 1041 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 RUVBL2Q9Y230 463 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-202ENST00000394963 E9PBE3 544 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 F5H5T6 163 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 KLHL41O60662 606 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 ZMPSTE24O75844 475 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 DSC2Q02487 901 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 VEPH1Q14D04 833 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 PDCD2Q16342 344 aaPredicted RBP16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 TMEM173Q86WV6 379 aaPredicted RBP16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 APOPT1Q96IL0 206 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 SERPINB11Q96P15 392 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 BPIFA1Q9NP55 256 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 ARHGEF38Q9NXL2 777 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 KANSL3Q9P2N6 904 aa16.21■□□□□ 0.18
SMARCD1-202ENST00000394963 ANKRD12Q6UB98 2062 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 E9PAM4 449 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 SLC11A1P49279 550 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 TTC7BQ86TV6 843 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 OR7D4Q8NG98 312 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 FTHL17Q9BXU8 183 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 ABCG8Q9H221 673 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 GRID1Q9ULK0 1009 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 TEX264Q9Y6I9 313 aa16.2■□□□□ 0.18
SMARCD1-202ENST00000394963 PSME4Q14997 1843 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms