RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 NCSTNQ92542 709 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 EMID1Q96A84 441 aaPredicted RBP18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 CENPKQ9BS16 269 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 CPSF2Q9P2I0 782 aaKnown RBP18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 IGSF9Q9P2J2 1179 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 CDY2AQ9Y6F7 541 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 CDY1Q9Y6F8 540 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 CASQ2O14958 399 aaPredicted RBP18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 ZNF865P0CJ78 1059 aaPredicted RBP18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 CD1EP15812 388 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 LMO2P25791 158 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 GRIA2P42262 883 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 MATKP42679 507 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 SERPINB8P50452 374 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 IFRD2Q12894 506 aaPredicted RBP18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 GRM2Q14416 872 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 ZBTB6Q15916 424 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 STRA8Q7Z7C7 330 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 KBTBD7Q8WVZ9 684 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 ZNF669Q96BR6 464 aaPredicted RBP18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 APBA2Q99767 749 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 RTKNQ9BST9 563 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 CREBZFQ9NS37 354 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 GABRQQ9UN88 632 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 DERAQ9Y315 318 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 RGS2P41220 211 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 LIMK2P53671 638 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 IRF9Q00978 393 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 PDK1Q15118 436 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 SLC25A52Q3SY17 297 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 GLRA4Q5JXX5 417 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 FSTL4Q6MZW2 842 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 LRRC52Q8N7C0 313 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 SNX27Q96L92 541 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 OR52B2Q96RD2 323 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 AGAP2Q99490 1192 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 GORASP1Q9BQQ3 440 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 PLEKHA5Q9HAU0 1116 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 TSC2P49815 1807 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 USP12O75317 370 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 IGHA2P01877 340 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 GLDCP23378 1020 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 SPRP35270 261 aaPredicted RBP18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 ABCG1P45844 678 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 ACADSBP45954 432 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 NUMBP49757 651 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 DLG2Q15700 870 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 CLEC14AQ86T13 490 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 NME8Q8N427 588 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 SOCS4Q8WXH5 440 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 KCNK16Q96T55 309 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 C16orf70Q9BSU1 422 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 CAB39LQ9H9S4 337 aa18.73■□□□□ 0.59
PCDHA1-202ENST00000394633 SHROOM3Q8TF72 1996 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 A0A096LPK6 155 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 ANKRD33BA6NCL7 494 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 CREB3O43889 395 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 DCAF4L1Q3SXM0 396 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 FBXL19Q6PCT2 694 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 PID1Q7Z2X4 250 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 CRYBG2Q8N1P7 616 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 OR6J1Q8NGC5 347 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 AGR3Q8TD06 166 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 SLC2A14Q8TDB8 520 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 PPP1R13LQ8WUF5 828 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 AGAP3Q96P47 875 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 LENG8Q96PV6 779 aaPredicted RBP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 FERMT1Q9BQL6 677 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 LRRC40Q9H9A6 602 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 PRDM16Q9HAZ2 1276 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 DMAP1Q9NPF5 467 aaPredicted RBP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 SYNJ2BP-COX16A0A087WUM0 186 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 TMEM114B3SHH9 223 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 KCNK1O00180 336 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 PEX1O43933 1283 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 RTN3O95197 1032 aaPredicted RBP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 MMP3P08254 477 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 ACAT1P24752 427 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 APLP1P51693 650 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 PAFAH1B3Q15102 231 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 MMEL1Q495T6 779 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 ZNF618Q5T7W0 954 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 C9orf57Q5W0N0 161 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 PSTKQ8IV42 348 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 TDRD5Q8NAT2 981 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 BEST2Q8NFU1 509 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 FAM149B1Q96BN6 582 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 HSFY1Q96LI6 401 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 COX16Q9P0S2 106 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 PACSIN3Q9UKS6 424 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 GNEQ9Y223 722 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 HES2Q9Y543 173 aa18.72■□□□□ 0.59
PCDHA1-202ENST00000394633 ZCWPW2A0A1B0GU75 182 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 LTFP02788 710 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 RPL26P61254 145 aaKnown RBP18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 BIRC2Q13490 618 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 DPYSQ14117 519 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 PDK3Q15120 406 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms